Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Transcriptome analysis of Bacillus cereus strain INRA C3 in response to iron depletion and lactoferrin, accomplished by RNA sequencing

ABSTRACT: Transcriptome analysis of Bacillus cereus strain INRA C3 in response to iron depletion and lactoferrin, accomplished by RNA sequencing

PROVIDER: PRJNA1007588 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR25706802_1.fastq.gz	Fastqsanger.gz
	SRR25706802_2.fastq.gz	Fastqsanger.gz
	SRR25706803_1.fastq.gz	Fastqsanger.gz
	SRR25706803_2.fastq.gz	Fastqsanger.gz
	SRR25706804_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Transcriptome analysis of Bacillus cereus strain INRA C3 in response to iron depletion and lactoferrin, accomplished by RNA sequencing

Project description:The iron-binding glycoprotein lactoferrin exhibits anti-bacterial activity. To investigate the overall response of Bacillus cereus to lactoferrin, total transcriptome analyses were performed. Growth conditions were mMOD minimal medium, minimal medium plus 10 mg/ml lactoferrin, as well as minimal medium without iron source for comparison. Differential regulation of genes involved in iron acquisition as well as genes encoding enterotoxins and further virulence factors was of special interest.

2023-10-01 | GSE241250 | GEO

Bacillus cereus strain:C3-5-12

Project description:Bacillus cereus strain:C3-5-12 Genome sequencing and assembly

| PRJNA318832 | ENA

Bacillus cereus strain:C3-5-14

Project description:Bacillus cereus strain:C3-5-14 Genome sequencing and assembly

| PRJNA318833 | ENA

PKA C3 depletion phosphoproteomics

Project description:Toxoplasma gondii is a ubiquitous parasite of warm-blooded animals. Parasites can switch into the chronic infection following exposure to stress. PKA C3 is a protein kinase involved in the differentiation process. Here, we determine the phosphoproteome of parasites conditionally depleted of PKA C3.

2024-07-12 | PXD042989 | Pride

Effect of lactoferrin treatment on iAEC2

Project description:In an attempt to understand the mode of antiviral action of lactoferrin on SARS-CoV-2 infection, we focused on the effect of lactoferrin on uninfected cells. We decided to use a physiologically relevant cell model of iPSC derived- alveolar epithelial cells (the iAEC2). We specifically focused on antiviral pathway triggered by lactoferrin on treated cells that could explain a cell-mediated effect of lactoferrin on viral replication

2021-07-15 | GSE171390 | GEO

Effects of lactoferrin, sophorolipids and lactoferrin-sophorolipids-assembly on gene expression of human dermal fibroblasts (HDFn)

Project description:The aim of this study is investigate effects of lactoferrin on human dermal fibroblasts and if sophorolipids influence effects of lactoferrin on human dermal fibroblasts.

2016-07-08 | GSE84144 | GEO

Caco2 response to methotrexate, lactoferrin, and methotrexate-lactoferrin co-exposure

Project description:Caco2 response to methotrexate, lactoferrin, and methotrexate-lactoferrin co-exposure

| PRJNA588171 | ENA

Expression data from Caenorhabditis elegans fed with a Lactoferrin-based product

Project description:Lactoferrin is a highly multifunctional protein. Indeed, it is involved in many physiological functions, including regulation of iron absorption and immune responses. We use microarrays to study the global genome expression of C. elegans fed with a nutraceutical product based on encapsulated lactoferrin.

2017-06-12 | GSE71482 | GEO

Effects of lactoferrin in PM2.5-induced nephrotoxicity

Project description:Several epidemiological pieces of evidence on air pollution health effects have notably accelerated in recent years. They have described the relationship between PM2.5 (ambient fine particulate matter of <2.5 μm in diameter) and kidney diseases. Previous research has shown that lactoferrin showed renoprotective effects against some kidney diseases. In the current study, we analyzed the transcriptional profiles of PM2.5 and lactoferrin using RNA sequencing (RNA-seq) and identified the key signaling pathway in the human kidney proximal tubular epithelial cell line (HK-2 cells).

2023-01-30 | GSE208331 | GEO

Distinct roles of ComK1 and ComK2 in gene regulation in Bacillus cereus (overexpressed ComK)

Project description:Comparison of the Bacillus cereus with overexpressed Bacillus subtilis ComK (Bacillus cereus pNWcomKBsu) vs Bacillus cereus carrying empty plasmid (Bacillus cereus pNW33N)

2011-07-28 | GSE27265 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data