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Corynorhinus townsendii

ABSTRACT: Corynorhinus townsendii Transcriptome or Gene expression

PROVIDER: PRJNA1011378 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR29348438_1.fastq.gz	Fastqsanger.gz
	SRR29348438_2.fastq.gz	Fastqsanger.gz
	SRR29348439_1.fastq.gz	Fastqsanger.gz
	SRR29348439_2.fastq.gz	Fastqsanger.gz
	SRR29348440_1.fastq.gz	Fastqsanger.gz

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Transcriptomic changes following hybridization and allopolyploidy in two salt marsh species

Project description:Transcriptomic changes following recent natural hybridization and allopolyploidy in the salt marsh species Spartina x townsendii and Spartina anglica (Poaceae) Allopolyploidy results from two events: the merger of divergent genomes and genome duplication. Both events have important functional consequences for the evolution and adaption of newly formed allopolyploid species. In spite of significant progress made the last years, a few studies have decoupled the effects of hybridization from genome duplication in the observed patterns of expression changes accompanying allopolyploidy in natural conditions. We used Agilent Rice oligo-microarrays to explore gene expression changes following allopolyploidy in Spartina that includes a classical example of recent allopolyploid speciation, S. anglica formed during the 19th century following genome duplication of the hybrid S. x townsendii. Our data indicate important, thought different effects of hybridization and genome duplication in the expression patterns of the hybrid and allopolyploid. Deviation from parental additivity was most important following hybridization and was accompanied by maternal expression dominance, although transgressively expressed genes were also encountered. Maternal dominance is attenuated following genome duplication in S. anglica while this species exhibits an increased number of transgressively over expressed genes. These results reflect the decoupled effects of the “genomic shock” following hybridization and genome redundancy, on the genetic, epigenetic and regulatory mechanisms characterizing transcriptomic evolution in allopolyploids.

2010-11-10 | GSE18961 | GEO

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