Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Gallus gallus

ABSTRACT: Analysis of changes in global miRNAs expression in chickens after CAstV infection

PROVIDER: PRJNA1013915 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR25951405.fastq.gz	Fastqsanger.gz
	SRR25951406.fastq.gz	Fastqsanger.gz
	SRR25951407.fastq.gz	Fastqsanger.gz
	SRR25951408.fastq.gz	Fastqsanger.gz
	SRR25951409.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 10

Similar Datasets

Comparative analysis of Gallus gallus cecal epithelia following Eimeria tenella infection

Project description:Relative expression levels of mRNAs in chicken cecal epithelia experimentally infected with Eimeria tenella were measured at 4.5 days post-infection. Two weeks old chickens were uninfected (negative control) or were orally inoculated with sporulated oocysts of Eimeria tenella. Cecal epithelia samples were collected from >12 birds in infected or uninfected group at 4.5 d following infections, in which samples from 4 birds were pooled together to form a total 3 biological replicates in each group. Parasite merozoites were also collected from four infected chickens at 5 d after infections. Uninfected control samples, merozoites and infection group samples were selected for RNA extraction and hybridization on Affymetrix microarrays. We used Affymetrix GeneChip chicken genome arrays to detail the chicken cecal epithelia gene expression in the control and E. tenella-infected birds. Infected, uninfected chicken cecal epithelia and merozoites were selected for RNA extraction and hybridization with Affymetrix microarrays. Our goal was to analyze global transcriptome changes in chicken cecal mucous membranes in response to E. tenella infection in vivo. We used infected (T1,T2,T3; three biological replicates) and uninfected (Neg1, Neg2, Neg3; three biological replicates) samples to identify genes that were differentially expressed. Meanwhile, RNA and probes were also prepared from parasite merozoites (Mzt) from infected samples (Mzt) and used as an additional control in microarray hybridization.

2012-12-10 | E-GEOD-39602 | biostudies-arrayexpress

Comparative analysis of Gallus gallus cecal epithelia following Eimeria tenella infection

2012-12-10 | GSE39602 | GEO

Gene expression analysis of chickens (Gallus gallus) infected with recombinant influenza viruses

Project description:H5N1 subtype highly pathogenic avian influenza virus has been spreading to Asia, Eurasia and African coutries. An original or six of recombinant H5N1 subtype influenza viruses with varying survivability were infected to chickens for elucidating genes correlated with pathogenicity. Two chickens were infected with each 10^6EID50/ head virus intranasally, and their lung was collected from infected chicken at 24 hours after infection.

2012-03-30 | E-GEOD-32378 | biostudies-arrayexpress

Gallus gallus

Project description:Global RNA-Seq analysis in chickens with divergent feed efficiency

| PRJNA276492 | ENA

Gallus gallus

Project description:Transcriptome analysis of Fowl adenovirus serotype 4 infection in chickens

| PRJNA498911 | ENA

Project description:Analysis of changes in global gene expression in chickens after CAstV infection

| PRJNA768620 | ENA

Gallus gallus

Project description:Gene expression analysis of host spleen responses to Marek's disease virus infection in susceptible and resistant chickens

| PRJNA140915 | ENA

Gallus gallus

Project description:Gene expression profile analysis of Fat and Lean chickens

| PRJNA118869 | ENA

Gallus gallus

Project description:Omics analysis of transgenic chickens compared with non-transgenic chickens [gender]

| PRJNA393326 | ENA

Gallus gallus

Project description:Omics analysis of transgenic chickens compared with non-transgenic chickens [genotypes]

| PRJNA393340 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data