Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Nitrosarchaeum sp. BO1

ABSTRACT: Ammonia-oxidizing Archaea enrichment culture from freshwater sediment - Nitrosarchaeum sp. BO1

PROVIDER: PRJNA1014936 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR25998879_1.fastq.gz	Fastqsanger.gz
	SRR25998879_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 3 of 3

Similar Datasets

mixed culture metagenome

Project description:Ammonia-oxidizing enrichment culture

| PRJNA289396 | ENA

Nitrosopumilus maritimus SCM1: exponential phase control vs. 24 hours starvation vs. 24 hours recovery after starvation

Project description:Transcriptional profiling of marine ammonia oxidizing archaea Nitrosopumilus maritimus cells comparing exponential phase control cells with cells under 24 hours starvation and with cells under recovery after 24 hours starvation. Goal was to determine the effects of global transcriptional responses of N. maritimus cells under ammonia starvation and recovery conditions.

2017-11-01 | GSE103848 | GEO

Project description:Ammonia-oxidizing Archaea

| PRJNA673573 | ENA

ammonia-oxidizing enrichment culture

Project description:ammonia-oxidizing enrichment culture Raw sequence reads

| PRJNA592577 | ENA

LC-MS/MS of autotrophic culture KS, that performs nitrate reduction coupled to iron(II) oxidation (NDFO)

Project description:Nitrate-reducing iron(II)-oxidizing bacteria are widespread in the environment contribute to nitrate removal and influence the fate of the greenhouse gases nitrous oxide and carbon dioxide. The autotrophic growth of nitrate-reducing iron(II)-oxidizing bacteria is rarely investigated and poorly understood. The most prominent model system for this type of studies is enrichment culture KS, which originates from a freshwater sediment in Bremen, Germany. To gain insights in the metabolism of nitrate reduction coupled to iron(II) oxidation under in the absence of organic carbon and oxygen limited conditions, we performed metagenomic, metatranscriptomic and metaproteomic analyses of culture KS. Raw sequencing data of 16S rRNA amplicon sequencing, shotgun metagenomics (short reads: Illumina; long reads: Oxford Nanopore Technologies), metagenome assembly, raw sequencing data of shotgun metatranscriptomes (2 conditions, triplicates) can be found at SRA in https://www.ncbi.nlm.nih.gov/bioproject/PRJNA682552. This dataset contains proteomics data for 2 conditions (heterotrophic and autotrophic growth conditions) in triplicates.

2021-05-17 | PXD023186 | Pride

freshwater sediment metagenome

Project description:ammonia-oxidizing archaea and ammonia-oxidizing bacteria sequencing

| PRJNA525546 | ENA

Brucella inopinata BO1

Project description:Brucella sp. BO1 genome sequencing project

| PRJNA41855 | ENA

Project description:H ammonia-oxidizing archaea

| PRJNA644484 | ENA

Project description:Ammonia-oxidizing archaea sequencing

| PRJNA985879 | ENA

marine metagenome