Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Bovine Fecal Microbiota

ABSTRACT: Bovine Fecal Microbiota Raw sequence reads

PROVIDER: PRJNA1018835 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR26131600_1.fastq.gz	Fastqsanger.gz
	SRR26131600_2.fastq.gz	Fastqsanger.gz
	SRR26131601_1.fastq.gz	Fastqsanger.gz
	SRR26131601_2.fastq.gz	Fastqsanger.gz
	SRR26131602_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 300

Similar Datasets

fecal microbiota

Project description:fecal microbiota Raw sequence reads

| PRJNA861965 | ENA

Fecal microbiota

Project description:Fecal microbiota of Cervinae Raw sequence reads

| PRJNA451167 | ENA

Fecal microbiota transplant rescues mice from sepsis

Project description:The aim of this study was to test the hypothesis that replenishing the microbiota with a fecal microbiota transplant (FMT) can rescue a host from an advanced stage of sepsis. We developed a clinically-relevant mouse model of lethal polymicrobial gut-derived sepsis in mice using a 4-member pathogen community (Candida albicans, Klebsiella oxytoca, Serratia marcescens, Enterococcus faecalis) isolated from a critically ill patient. In order to mimic pre-operative surgical patient condition mice were exposed to food restriction and antibiotics. Approximately 18 hours prior to surgery food was removed from the cages and the mice were allowed only tap water. Each mouse received an intramuscular Cefoxitin injection 30 minutes prior to the incision at a concentration of 25 mg/kg into the left thigh. Mice were then subjected to a midline laparotomy, 30% hepatectomy of the left lateral lobe of the liver and a direct cecal inoculation of 200 µL of the four pathogen community. On postoperative day one, the mice were administered rectal enema. Mice were given either 1 ml of fecal microbiota transplant (FMT) or an autoclaved control (AC). This was again repeated on postoperative day two. Mice were then followed for mortality. Chow was restored to the cages on postoperative day two, approximately 45 hours after the operation. The injection of fecal microbiota transplant by enema significantly protected mice survival, reversed the composition of gut microflora and down-regulated the host inflammatory response. The cecum, left lobe of the liver, and spleen were isolated from mice for microarray processing with three or more replicates for six expermental conditions: non-treated control, SAHC POD1, SAHC.AC POD2, SAHC.FMT POD2, SAHC.AC POD7, SAHC.FMT POD7

2015-07-30 | E-GEOD-71530 | biostudies-arrayexpress

Mouse Fecal Microbiota

Project description:Mouse Fecal Microbiota Raw sequence reads

| PRJNA1086696 | ENA

Equine fecal microbiota

Project description:Equine fecal microbiota Raw sequence reads

| PRJNA475435 | ENA

Rat fecal Microbiota

Project description:Rat fecal Microbiota Raw sequence reads

| PRJNA809388 | ENA

Canine fecal microbiota

Project description:Canine fecal microbiota Raw sequence reads