Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Root endophytic microbiome of Barley plants

ABSTRACT: Root endophytic microbiome of Barley plants Raw sequence reads

PROVIDER: PRJNA1021955 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR26275500_1.fastq.gz	Fastqsanger.gz
	SRR26275500_2.fastq.gz	Fastqsanger.gz
	SRR26275501_1.fastq.gz	Fastqsanger.gz
	SRR26275501_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 197

Similar Datasets

ephemeral plants root endophytic bacteria

Project description:ephemeral plants root endophytic bacteria Raw sequence reads

| PRJNA884840 | ENA

Microbial communities of wheat plants inoculated with endophytic bacterium Enterobacter sp. SA187

Project description:Global warming has become a critical challenge to food safety, causing severe yield losses of major crops worldwide. Here, we report that the endophytic bacterium Enterobacter sp. SA187 induces thermotolerance of crops in a sustainable manner. Microbiome diversity of wheat plants is positively influenced by SA187 in open field agriculture, indicating that beneficial microbes can be a powerful tool to enhance agriculture in open field agriculture.

2021-02-28 | GSE147553 | GEO

Piriformospora indica on Arabidopsis and barley root material

Project description:Broad-host root endophytes establish long-term interactions with a large variety of plants, thereby playing a significant role in natural and managed ecosystems and in evolution of land plants. To exploit plants as living substrates and to establish a compatible interaction with morphologically and biochemically extremely different hosts, endophytes must respond and adapt to different plant signals and host metabolic states. Here we identified host-adapted colonization strategies and host-specific effector candidates of the mutualistic root endophyte Piriformospora indica by a global investigation of fungal transcriptional responses to barley and Arabidopsis at different symbiotic stages. Additionally we examined the role played by nitrogen in these two diverse associations. Cytological studies and colonization analyses of a barley mutant and fungal RNAi strains show that distinct physiological and metabolic signals regulate host-specific lifestyle in P. indica. This is the foundation for exploring how distinct fungal and host symbiosis determinants modulate biotrophy in one host and saprotrophy in another host and, ultimately, gives hints into the mechanisms underlying host adaptation in root symbioses.

2013-07-22 | GSE47775 | GEO

Shoot and root of barley seeds: Drying treatment

Project description:Transcriptional profiling of barley shoot and root with drying

2014-04-01 | GSE41514 | GEO

Shoot and root of barley seeds: Aluminum treatment

Project description:Transcriptional profiling of barley shoot and root with AlCl3

2014-04-01 | GSE41512 | GEO

Shoot and root of barley seeds: Salt treatment

Project description:Transcriptional profiling of barley shoot and root with 0.2M NaCl

2014-04-01 | GSE41517 | GEO

Proteomics of endophytic fungi enhance plant growth promotion in rice root

Project description:Endophytic fungi are root-inhabiting fungi that can promote plant growth in a variety of ways. They can directly stimulate plant growth by producing phytohormones, such as auxin and gibberellins. They can also indirectly promote plant growth by helping plants to acquire nutrients, such as nitrogen and phosphorus, and by protecting plants from pests and pathogens.In this study, we used a proteomic approach to identify the proteins that are expressed in rice plants after they are treated with endophytic fungi. We found that the treatment with endophytic fungi resulted in the expression of a number of proteins involved in plant growth, nutrient acquisition, and defense. These results suggest that endophytic fungi can promote plant growth and improve plant resilience to stress.

2024-09-10 | PXD045242 | JPOST Repository

Piriformospora indica on Arabidopsis and barley root material

2013-07-22 | E-GEOD-47775 | biostudies-arrayexpress

Shoot and root of barley seeds: Cold treatment

Project description:Transcriptional profiling of barley shoot and root with incubating at 4˚C

2014-04-01 | GSE41513 | GEO

Shoot and root of barley seeds: Non-treatment (control)

Project description:Transcriptional profiling of barley shoot and root with no-treatment

2014-04-01 | GSE41516 | GEO