Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Gene expression profile at the single cell level of Gatad2b WT, Het and KO E16.5 embryos

ABSTRACT: Gene expression profile at the single cell level of Gatad2b WT, Het and KO E16.5 embryos

PROVIDER: PRJNA1023245 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR26264000.fastq.gz	Fastqsanger.gz
	SRR26264001.fastq.gz	Fastqsanger.gz
	SRR26264002.fastq.gz	Fastqsanger.gz
	SRR26264003.fastq.gz	Fastqsanger.gz
	SRR26264004.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 10

Similar Datasets

Gene expression profile at the single cell level of Gatad2b WT, Het and KO E16.5 embryos

Project description:We performed single-cell RNA sequencing (scRNA-seq) on cortical samples obtained fromGatad2bstop/+ and WT littermates at a single embryonic time point (E16.5) in order to explore underlying mechanisms of Gatad2b function. We also generated Gatad2bstop/stop scRNA-seq data to identify dosage sensitive targets of Gatad2b

2023-10-02 | GSE244477 | GEO

Single cell RNA-seq from cortical cells from e16.5 HET and COP1 KO mice

Project description:Single cell RNA-seq from cortical cells from e16.5 HET and COP1 KO mice

| PRJNA438211 | ENA

RNA Sequencing Analysis of Nicol-Het, Nicol-KO and Ros1-KO Caput Epididymal Transcriptomes.

Project description:Purpose: The goal of this study is to detect differentially expressed genes, between Nicol +/- (Nicol-Het), Nicol-/- (Nicol-KO), and Ros1-/- (Ros1-KO) caput epididymis by RNA sequencing Methods: Caput epidiymal mRNA profiles of 14-week-old Nicol-Het, Nicol-KO, and Ros1-KO mice were generated by deep sequencing, in triplicate, using Illumina NovaSeq6000. Results: RNA-seq data identified differentially expressed transcripts. Conclusions: Our results show that the expression of many genes were downregulated in Nicol-KO caput epididymis compared with Nicol-Het one. The gene downregulation of Nicol-KO caput epididymis was similar to that of Ros1-KO one.

2023-02-27 | GSE206174 | GEO

Age-dependent comparison of transcriptional signature of lamina propria anti-inflammatory macrophages of Il10rb-/- (KO) and Il10rb+/- (het) mice

Project description:We report that colonic lamina propria anti-inflammatory macrophages from Il10rb-/- (KO) mice at 12 weeks possessed significantly high levels of proinflammatory transcripts compared to the ones from Il10rb+/- (het) controls. While the transcriptional profile between macrophages from KO and het mice was comparable at 1 weeks and did not possess significant levels of proinflammatory transcripts, we show that the macrophages from KO mice were enriched for proinflammatory transcripts at 3 weeks compared to the ones from 3 week old het controls. These data indicate that the anti-inflammatory signature of colonic lamina propria macrophages from Il10rb-/- mice is compromized at 3 weeks.

2017-08-03 | GSE97875 | GEO

CASP8 C362A KI MLKL KO e16.5 intestine RNAseq

Project description:CASP8 C362A KI MLKL KO e16.5 intestine RNAseq

| PRJNA516934 | ENA

RNAseq E16.5 mouse skin Irf6 KO vs WT

Project description:RNAseq E16.5 mouse skin Irf6 KO vs WT

| PRJNA510612 | ENA

Transcriptome analysis of whole brain tissue from Bahd1+/+ (WT) and Bahd1-/- (KO) mouse embryos (stage E16.5)

Project description:Transcriptome analysis of whole brain tissue from Bahd1+/+ (WT) and Bahd1-/- (KO) mouse embryos (stage E16.5)

| PRJNA548390 | ENA

Transcriptome analysis of whole brain tissue from Bahd1+/+ (WT) and Bahd1-/- (KO) mouse embryos (stage E16.5)

Project description:Comparisons of brain gene expression profiles of Bahd1-KO mouse embryos to those of wild-type littermates

2020-05-21 | GSE132579 | GEO

Next Generation Sequencing Analysis of chemically reprogrammed osteoblasts from Beta-actin Wildtype (WT) Heterozygotes (HET) and knockout (KO) Mouse Embryonic Fibroblast (MEFs)

Project description:mRNA profiles of chemically reprogrammed osteoblasts from Beta-actin Wildtype (WT) Heterozygotes (HET) and knockout (KO) Mouse Embryonic Fibroblast (MEFs)

2019-08-06 | GSE135392 | GEO

Transcriptome analysis in the Zfp541 Het and Zfp541 KO testes

Project description:Transcriptome analysis in the Zfp541 Het and Zfp541 KO testes

| PRJNA770648 | ENA