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Single-cell RNA sequencing reveals roles of fibroblasts during intestinal injury and repair in rats with severe acute pancreatitis

ABSTRACT: Single-cell RNA sequencing reveals roles of fibroblasts during intestinal injury and repair in rats with severe acute pancreatitis

PROVIDER: PRJNA1026528 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR26334940_1.fastq.gz	Fastqsanger.gz
	SRR26334940_2.fastq.gz	Fastqsanger.gz
	SRR26334941_1.fastq.gz	Fastqsanger.gz
	SRR26334941_2.fastq.gz	Fastqsanger.gz
	SRR26334942_1.fastq.gz	Fastqsanger.gz

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Project description:PurposeTo explore the molecular mechanisms of intestinal injury and treatment by analyzing changes in cellular heterogeneity and composition in rat ileal tissue during injury and treatment processes.MethodsWe constructed a rat model of SAP and evaluated treatment with an injected of monoacylglycerol lipase (MAGL) inhibitor (JZL184) solution using three experimental groups: healthy male Sprague-Dawley (SD) rats injected with vehicle (CON), male SD SAP model rats injected with vehicle (SAP), and male SAP rats injected with JZL184. We obtained and prepared a single-cell suspension of ileal tissue of each rat for single-cell transcriptome sequencing.ResultsThis project classified changes in cellular heterogeneity and composition in rat ileal tissue during SAP-induced intestinal injury and MAGL treatment. We found that the number of fibroblast clusters was decreased in the SAP group relative to the CON group, and increased after JZL184 treatment. Further analysis of differences in gene expression between cell clusters in each group reveals that fibroblasts had the greatest number of differentially expressed genes. Most notably, expression of genes involved in communication between cells was found to vary during SAP-induced intestinal injury and JZL184 treatment. Among these changes, the degree of difference in expression of genes involved in communication between fibroblasts and other cells was the highest, indicating that fibroblasts in rat ileal tissue affect intestinal injury and repair through cell-to-cell communication. In addition, our results reveal that differentially expressed RNA-binding proteins in fibroblasts may affect their functions in intestinal injury and treatment by affecting the expression of genes regulating communication between cells.ConclusionThese findings emphasize the importance of understanding the interactions between fibroblasts and other cells in the context of intestinal injury, providing valuable insights for further exploring molecular mechanisms and insight for discovering new treatment targets and strategies.

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Single-cell RNA sequencing reveals roles of fibroblasts during intestinal injury and repair in rats with severe acute pancreatitis

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