Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Rumen microbe

ABSTRACT: Tan sheep and Hu sheep rumen microbe MAGs

PROVIDER: PRJNA1029728 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR26493466.fastq.gz	Fastqsanger.gz
	SRR26493467.fastq.gz	Fastqsanger.gz
	SRR26493468.fastq.gz	Fastqsanger.gz
	SRR26493469.fastq.gz	Fastqsanger.gz
	SRR26493470.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 20

Similar Datasets

Tan sheep and Hu sheep rumen microbe

Project description:Tan sheep and Hu sheep rumen microbe Metagenome

| PRJNA1029673 | ENA

The mechanism of promoting proliferation of rumen epithelial cells in Tan sheep by adding succinate to the diet based on the interaction between rumen microbiota and host.

Project description:A healthy rumen is crucial for normal growth and improved production performance of ruminant animals. Rumen microbes participate in and regulate rumen epithelial function, and the diverse metabolites produced by rumen microbes are important participants in rumen microbe-host interactions. SCFAs, as metabolites of rumen microbes, have been widely studied, and propionate and butyrate have been proven to promote rumen epithelial cell proliferation. Succinate, as an intermediate metabolite in the citric acid cycle, is a final product in the metabolism of certain rumen microbes, and is also an intermediate product in the microbial synthesis pathway of propionate. However, its effect on rumen microbes and rumen epithelial function has not been studied. It is unclear whether succinate can stimulate rumen epithelial development. Therefore, in this experiment, Chinese Tan sheep were used as experimental animals to conduct a comprehensive analysis of the rumen microbiota community structure and rumen epithelial transcriptome, to explore the role of adding succinate to the diet in the interaction between the rumen microbiota and host.

2023-06-12 | GSE233696 | GEO

Rumen content

Project description:Tan sheep rumen content 16s rRNA sequence

| PRJNA1156902 | ENA

Community composition of plant biomass-associated bacteria in sheep rumen

Project description:Microbiome DNA from the adhering fraction of a sheep rumen. The RSTs were generated using an improved version of SARST (referred to as iSARST) from the microbiome DNA extracted from the adhering fraction of the rumen content taken from a sheep. The iSARST method is going to be submitted to Nature Biotechnology for publication. Keywords: other

2004-10-15 | E-GEOD-1842 | biostudies-arrayexpress

Community composition of plant biomass-associated bacteria in sheep rumen

2004-10-15 | GSE1842 | GEO

RNA seq of ventral rumen wall of Australian sheep

Project description:Experiment to understand relationships between sheep rumen wall transcriptome and microbial methane emissions

2017-12-30 | GSE81847 | GEO

Hu sheep rumen microbial metatranscriptome

Project description:Hu sheep rumen microbial metatranscriptomics raw sequence reads

| PRJNA517369 | ENA

Project description:Sequencing of rumen microbe of Hu sheep

| PRJNA908722 | ENA

sheep rumen

Project description:sheep rumen Metagenome

| PRJNA527116 | ENA

Proteome Changes of Sheep Rumen Epithelium during Post-natal Development

Project description:a shotgun approach and bioinformatics analyses to investigate and compare proteomic profile of sheep rumen epithelium tissue on day 0, 15, 30, 45 and 60 of age.

2023-03-11 | PXD034787 | Pride

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data