Project description:We compared genetic profiles of planktonic stage to biofilm stage of deep sea bacterium Pseudoalteromonas sp. SM9913 and revealed genetic features during switch from planktonic to pellicle stage in Pseudoalteromonas sp. SM9913. mRNA profiles of Pseudoalteromonas sp. SM9913 planktonic cells, initial pellicle cells and mature pellicle cells were generated by Illumina Hiseq2000.

2015-11-03 | E-GEOD-74569 | biostudies-arrayexpress

Pseudoalteromonas maricaloris strain:not applicable | isolate:not applicable

Project description:Pseudoalteromonas maricaloris strain:not applicable | isolate:not applicable Genome sequencing

| PRJNA1031957 | ENA

Pseudoalteromonas maricaloris strain:WJX-04 | isolate:not applicable

Project description:Pseudoalteromonas maricaloris strain:WJX-04 | isolate:not applicable Genome sequencing

| PRJNA1034512 | ENA

Bacillus subtilis strain:Coral Sea | isolate:Coral Sea

Project description:Bacillus subtilis strain:Coral Sea | isolate:Coral Sea Genome sequencing

| PRJNA1097372 | ENA

Pseudoalteromonas maricaloris strain:LMG 19692

Project description:Pseudoalteromonas maricaloris strain:LMG 19692 Genome sequencing and assembly

| PRJNA576150 | ENA

Transcriptome analysis of planktonic, initial pellicle, and mature pellicle of Pseudoalteromonas sp. SCSIO 11900

Project description:One of the most distinct features of Pseudoalteromonas sp. SCSIO 11900 is its ability to form a very robust pellicle than most Pseudoalteromonas strains. Thus we want to identify the genes essential for the pellicle formation of SCSIO 11900. We compared transcriptom profiles of planktonic cells, initial pellicle and mature pellicle of coral Pseudoalteromonas sp. SCSIO 11900 and revealed that some unique genes from horizontal gene transfer is involved in the pellicle formation of SCSIO 11900.

2017-04-04 | GSE97322 | GEO

Red Sea coral metatranscriptomes

Project description:Red Sea coral metatranscriptomes

| PRJNA638633 | ENA

Red Sea coral virome

Project description:Red Sea coral metagenomes

| PRJNA437202 | ENA