Agrotis segetum granulovirus
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ABSTRACT:
PROVIDER: PRJNA1057566 | ENA |
REPOSITORIES: ENA
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Project description:From 1905 to present, cutworm outbreaks have caused substantial yield losses in North Western (NW) Europe. Early authors pointed to dry summers as the trigger; around 1980, the explanation was improved via modelling of historical data. The number of precipitation days and the July temperature proved to be important, and in experiments, moist soil caused considerable mortality. This information was used in preliminary forecasting with pheromone trap catches as biofix for estimations of occurrence and survival. As more precise information on temperature effects on growth and survival was needed, we performed experiments on growth and mortality effects on egg, all larval instars and pupae. We found clear positive relations between temperatures below 35 °C and development rates of eggs, all larval instars and pupae. Mortality was also affected, and low temperature caused pronounced mortality of young larvae. The severe mortality under cold, moist conditions versus high survival under warm, dry conditions may explain both the lack of relation between captures and injuries and the pronounced fluctuations of cutworm attacks in NW Europe reported from 1905 to present. These variations are likely to increase with the climate change and suggest a reanalysis of data on trap capture and injuries to improve decision support and sustainability in Integrated Pest Management.
| S-EPMC6359476 | biostudies-literature
Project description:Agrotis segetum Genome sequencing and assembly
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Project description:Comparison of female pheromone glands in Agrotis segetum and Agrotis ipsilon
2011-01-01 | E-MEXP-1419 | biostudies-arrayexpress
Project description:We carried out the transcriptome analysis to identify the key genes involved in pear fruit semi-russet formation, by comparing the CK (russet) and bagging treated (green) ‘Cuiguan’ pear fruit skin 95 DAFB.
2020-10-31 | GSE153994 | GEO
Project description:Agrotis segetum isolate:AsSz2019 Genome sequencing and assembly
| PRJNA933090 | ENA
Project description:Agrotis segetum strain:Swedish Transcriptome or Gene expression
| PRJNA244025 | ENA
Project description:BackgroundIn insects, airborne chemical signals are mainly detected by two receptor families, odorant receptors (ORs) and ionotropic receptors (IRs). Functions of ORs have been intensively investigated in Diptera and Lepidoptera, while the functions and evolution of the more ancient IR family remain largely unexplored beyond Diptera.ResultsHere, we identified a repertoire of 26 IRs from transcriptomes of female and male antennae, and ovipositors in the moth Agrotis segetum. We observed that a large clade formed by IR75p and IR75q expansions is closely related to the acid-sensing IRs identified in Diptera. We functionally assayed each of the five AsegIRs from this clade using Xenopus oocytes and found that two receptors responded to the tested ligands. AsegIR75p.1 responded to several compounds but hexanoic acid was revealed to be the primary ligand, and AsegIR75q.1 responded primarily to octanoic acid, and less so to nonanoic acid. It has been reported that the C6-C10 medium-chain fatty acids repel various insects including many drosophilids and mosquitos. We show that the C6-C10 medium-chain fatty acids elicited antennal responses of both sexes of A. segetum, while only octanoic acid had repellent effect to the moths in a behavioral assay. In addition, using fluorescence in situ hybridization, we demonstrated that the five IRs and their co-receptor AsegIR8a are not located in coeloconic sensilla as found in Drosophila, but in basiconic or trichoid sensilla.ConclusionsOur results significantly expand the current knowledge of the insect IR family. Based on the functional data in combination with phylogenetic analysis, we propose that subfunctionalization after gene duplication plays an important role in the evolution of ligand specificities of the acid-sensing IRs in Lepidoptera.
| S-EPMC8822749 | biostudies-literature
Project description:BackgroundMoths rely heavily on pheromone communication for mate finding. The pheromone components of most moths are modified from the products of normal fatty acid metabolism by a set of tissue-specific enzymes. The turnip moth, Agrotis segetum uses a series of homologous fatty-alcohol acetate esters ((Z)-5-decenyl, (Z)-7-dodecenyl, and (Z)-9 tetradecenyl acetate) as its sex pheromone components. The ratio of the components differs between populations, making this species an interesting subject for studies of the enzymes involved in the biosynthetic pathway and their influence on sex pheromone variation.ResultsIllumina sequencing and comparative analysis of the transcriptomes of the pheromone gland and abdominal epidermal tissue, enabled us to identify genes coding for putative key enzymes involved in the pheromone biosynthetic pathway, such as fatty acid synthase, β-oxidation enzymes, fatty-acyl desaturases (FAD), fatty-acyl reductases (FAR), and acetyltransferases. We functionally assayed the previously identified ∆11-desaturase [GenBank: ES583599, JX679209] and FAR [GenBank: JX679210] and candidate acetyltransferases (34 genes) by heterologous expression in yeast. The functional assay confirmed that the ∆11-desaturase interacts with palmitate and produces (Z)-11-hexadecenoate, which is the common unsaturated precursor of three homologous pheromone component acetates produced by subsequent chain-shortening, reduction and acetylation. Much lower, but still visible, activity on 14C and 12C saturated acids may account for minor pheromone compounds previously observed in the pheromone gland. The FAR characterized can operate on various unsaturated fatty acids that are the immediate acyl precursors of the different A. segetum pheromone components. None of the putative acetyltransferases that we expressed heterologously did acetylate any of the fatty alcohols tested as substrates.ConclusionsThe massive sequencing technology generates enormous amounts of candidate genes potentially involved in pheromone biosynthesis but testing their function by heterologous expression or gene silencing is a bottleneck. We confirmed the function of a previously identified desaturase gene and a fatty-acyl reductase gene by heterologous expression, but the acetyltransferase postulated to be involved in pheromone biosynthesis remains illusive, in spite of 34 candidates being assayed. We also generated lists of gene candidates that may be useful for characterizing the acetyl-CoA carboxylase, fatty acid synthetase and β-oxidation enzymes.
| S-EPMC4575462 | biostudies-literature