Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Gut Microbiota Diversity in Dung Beetles (Catharsius molossus) Across Geographical Variations and Brood Ball-Mediated Microbial Transmission

PROVIDER: PRJNA1063573 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR27491633_1.fastq.gz	Fastqsanger.gz
	SRR27491633_2.fastq.gz	Fastqsanger.gz
	SRR27491634_1.fastq.gz	Fastqsanger.gz
	SRR27491634_2.fastq.gz	Fastqsanger.gz
	SRR27491635_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 94

Similar Datasets

Phelotrupes auratus

Project description:Genome Sequencing of Dung Beetles

| PRJDB13330 | ENA

Kinome-wide RNAi screen uncovers role of Ballchen in maintenance of gene activation by trithorax group in Drosophila

Project description:We report an ex vivo kinome-wide RNAi screen in Drosophila aimed to identify cell signaling genes that facilitate trxG to counteract PcG mediated repression. From the list of trxG candidates, Ballchen (BALL), a histone kinase, known to phosphorylate histone H2A at threonine 119 (H2AT119p), was characterized as a trxG regulator. BALL co-localizes with Trithorax on chromatin and depletion of BALL results in increased H2AK118 ubiquitination, a histone mark central to PcG mediated gene silencing. Moreover, analysis of genome-wide binding profile of BALL shows an overlap with 85% known binding sites of TRX across the genome. Both BALL and TRX are highly enriched at actively transcribed genes, which also correlate with presence of H3K4me3 and H3K27ac. We propose that BALL mediated signal positively contributes to the maintenance of gene activation by trxG by counteracting the repressive effect of PcG.

2021-01-29 | GSE165685 | GEO

Exploring the integration of innovation in the dorsal head of Onthophagus beetles using head compartment-specific RNAseq

Project description:The general morphology of the insect head has remained relatively unchanged through more than 400 million years of evolution. Yet throughout this period this same region has also become a hotspot for evolutionary novelty, yielding structures such as the eyestalks of stalk-eyed flies or the cephalic horns of dung beetles. How novelty can be integrated within ancient complex traits without disrupting the function and formation of that trait is a foundational, yet largely unresolved question in developmental and evolutionary biology. Here, we approached this question by performing unique, head compartment specific RNAseq using the heads of Onthophagus taurus beetles, which bear impressive posterior horns in males. We sequenced the transcriptomes in horned males and hornless females from six distinct head compartments covering two major axes of patterning: anterior to posterior (AP) and medial to lateral (ML). Our results provide evidence of differential compartmentalization of the head along both AP and ML axes, and reveal striking parallels between morphological and transcriptomic complexity – that is, head regions with more complex morphologies, such as the posterior region, are more transcriptionally intricate compared to morphologically homogenous regions, such as the anterior of the head. Our findings support the hypothesis that the integration of novel traits within ancestral trait complexes may require the recruitment of additional genes and pathways into the networks instructing within and among compartment development. However, sexual dimorphism in posterior horn development was not paralleled by a corresponding sexual dimorphism in transcriptional complexity, instead hornless females exhibited approximately the same diversity of differentially expressed genes across posterior head compartments than did horn-bearing males.

2020-01-01 | GSE136677 | GEO

Project description:iDNA from gut contents of dung beetles

| PRJNA1075326 | ENA

MELOHOSTRACE: Whole genome polymorphism across Meloidogyne incognita isolates showing different biological traits

Project description:High-coverage whole genome sequencing of 11 Brazilian isolates of the root-knot nematode Meloidogyne incognita, presenting different host plant preferences and different geographical origins. Four M. incognita host races had been proposed in the past, based on host (in)compatibility on four different plant strains. The objective was to assess whether genomic variations (SNP) correlate with host range compatibility, geographical origin and host plant of origin.

2019-07-10 | GSE116847 | GEO

Project description:Metagenomic profiling of soil enriched with cow dung and composted by dung beetles

| PRJNA1151044 | ENA

Molossus molossus

Project description:Molossus molossus overview

| PRJNA646805 | ENA

Study of Patient Navigation to Reduce Social Inequalities

Project description:Variations in participation to the colorectal cancer screening seems to reveal social and geographical inequalities. Our study will investigate whether patient navigation could increase the participation to the colorectal cancer screening and in the same time, reduce the social inequalities.

| 2122065 | ecrin-mdr-crc

Project description:Mitochondrial phylogeny of two ball-rolling dung beetles, Gymnopleurus mopsus and Gymnopleurus geoffroyi (Coleoptera: Scarabaeidae: Scarabaeinae), with notes on the phylogenetic relationships within Scarabaeinae

| PRJNA1048128 | ENA

Gymnopleurus mopsus

| PRJNA1048117 | ENA