Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Transcriptional response of Gemmatimonas phototrophica to changing light regimes [AP64_LowLight]

ABSTRACT: Transcriptional response of Gemmatimonas phototrophica to changing light regimes [AP64_LowLight]

PROVIDER: PRJNA1065381 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR27562079_1.fastq.gz	Fastqsanger.gz
	SRR27562079_2.fastq.gz	Fastqsanger.gz
	SRR27562080_1.fastq.gz	Fastqsanger.gz
	SRR27562080_2.fastq.gz	Fastqsanger.gz
	SRR27562081_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 42

Similar Datasets

Transcriptional response of Gemmatimonas phototrophica to changing light regimes [AP64_O2]

Project description:In this study, we provide a time-series analysis of the transcriptional response of Gemmatimonas phototrophica AP64T during the dark-to-light transition under aerobic and semiaerobic conditions. By analysing its transcriptome, focussing especially on PS-related genes, we tested the hypothesis that G. phototrophica might constitute an example of an anoxygenic phototroph on its evolutionary pathway from anaerobic to aerobic life-style.

2024-02-01 | GSE253349 | GEO

Transcriptional response of Gemmatimonas phototrophica to changing light regimes [AP64_LowLight]

2024-02-01 | GSE253351 | GEO

Transcriptional response of Gemmatimonas phototrophica to changing light regimes [AP64_HighLight]

2024-02-01 | GSE253350 | GEO

Transcriptional response of Gemmatimonas phototrophica to changing light regimes [AP64_HighLight]

Project description:Transcriptional response of Gemmatimonas phototrophica to changing light regimes [AP64_HighLight]

| PRJNA1065375 | ENA

Transcriptional response of Gemmatimonas phototrophica to changing light regimes [AP64_O2]

Project description:Transcriptional response of Gemmatimonas phototrophica to changing light regimes [AP64_O2]

| PRJNA1065376 | ENA

Gemmatimonas phototrophica

Project description:Gemmatimonas phototrophica overview

| PRJNA902444 | ENA

LC-MS/MS of the reaction center-light harvesting 1 complex from Gemmatimonas phototrophica

Project description:Gemmatimonas phototrophica is the only phototrophic member of the recently discovered bacterial phylum Gemmatimonadetes. It was isolated from a freshwater lake in the Gobi desert and first described in 2014. So far, Gemmatimonas phototrophica is the only bacterium to have received a complete set of photosynthesis-related genes by horizontal gene transfer from an ancient phototrophic species from the phylum Proteobacteria. This organism illustrates the possibility for engineering phototrophic capability in a non-phototrophic organism and is therefore of great interest to the field of synthetic biology. The structure of the photosynthetic reaction center-light harvesting 1 complex is under investigation by cryo-EM. Proteomic analysis verified the identities of the expected protein components of this complex and, additionally revealed polypeptides that were previously undiscovered and could be mapped to the cryo-EM images.

2022-04-04 | PXD024609 | Pride

Gemmatimonas phototrophica strain:AP64

Project description:Gemmatimonas phototrophica strain:AP64 Genome sequencing

| PRJNA213561 | ENA

Response of the transcriptome to changing light regimes.

Project description:Response of the transcriptome to changing light regimes.

| PRJNA1029892 | ENA

Transcriptome of Dinoroseobacter shibae under changeing light regimes

Project description:D. shibae was cultivated under changing light regimes and samples for transcriptome and metabolome were taken.

2014-07-01 | GSE57164 | GEO