Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Farm Dairy Effluents

PROVIDER: PRJNA1068640 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR27765400_1.fastq.gz	Fastqsanger.gz
	SRR27765400_2.fastq.gz	Fastqsanger.gz
	SRR27765401_1.fastq.gz	Fastqsanger.gz
	SRR27765401_2.fastq.gz	Fastqsanger.gz
	SRR27765402_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 48

Similar Datasets

LncRNA sequencing of Laoshan dairy goat mammary gland at early, peak and late lactation stages.

Project description:Five healthy Laoshan dairy goats (four years old, third lactation) from Qingdao Laoshan dairy goat primary farm (Shandong Province, China) were used. The mammary gland samples were collected surgically after general anaesthesia using Xylazine Hydrochloride injection solution (Huamu Animal Health Products Co., Ltd. China) at corresponding lactation stage, including early, peak and late lactations.

2020-02-22 | GSE135930 | GEO

Cathepsin S in Mycobacterium avium subsp. paratuberculosis Infected Dairy Cows

Project description:In this study, samples of 16 dairy cows from a MAP infected farm were used. Serum, milk and fecal samples were collected. Categorizing these cows into two groups based on their MAP infection status different standard methods for detection MAP were applied. Healthy controls showed no positive results in enzyme-linked immunosorbent assay (ELISA) with serum and milk samples (cattletype MAP Ab, Qiagen, Hilden, Germany; In-direct, IDVet, Grabels, France) and after cultivation of fecal samples on commercial Her-rold´s Egg Yolk Agars (HEYM agar, Becton Dickinson, Heidelberg, Germany) for 12 weeks. Cows with positive results were grouped into MAP infected cows. Specifically, for mass spectrometry analysis serum of seven MAP infected cows and seven healthy controls were used. All animals were from the same farm and were kept under the same environmental conditions. For additional mass spectrometry analysis with a further control group sam-ples of 21 dairy cows from an uninfected farm were examined. All cattle from this farm showed negative results in ELISA with serum and milk samples. Additionally, there was never a positive result in regularly tested fecal samples and sock swab samples of this farm. For verification of differential CTSS expression in Western blot analysis five dairy cows from another infected farm were consultedincluded. MAP status of these cows was analyzed by cultivation of fecal samples on HEYM agar for 12 weeks and ELISA with se-rum samples. In detail, two cattle were categorized into healthy controls and three cattle into MAP infected cows. Withdrawal of bovine venous whole blood and experi-mental protocols were approved by the local authority, Government of Upper Bavaria, permit no. ROB-55.2-2532.Vet_03-17-106.

2024-06-22 | PXD048042 | Pride

Project description:Dairy farm microbiome

| PRJNA627834 | ENA

Project description:Aeromonas from a dairy farm

| PRJNA723354 | ENA

Project description:Metagenomic sequencing from dairy farm samples

| PRJNA671703 | ENA

Project description:Metagenomics of dairy farm environmental samples

| PRJNA1153729 | ENA

Yersinia pseudotuberculosis from a dairy farm

Project description:Yersinia pseudotuberculosis from a dairy farm

| PRJEB27913 | ENA

Gene expression profiles in cows subjected to different stress level as assessed by cortisol in milk

Project description:To assess how different levels of stress exposure affect gene regulation mechanisms in cattle, we investigated gene expression in 13 Italian Red Pied dairy cows falling in the high- and low-variant tails of the distribution of milk cortisol concentration (MC), a neuroendocrine biomarker of stress in dairy cows, measured in 126 animals belonging to the same farm in the framework of the Gen2Phen Italian project. The ‘low-’ and ‘high-cortisol’ groups of animals had MC<370 pg/ml and>810 pg/ml, respectively. To date, 13 animals (6 low- and 7 high-MC) have been sequenced. We detected significant fold differences in the expression of 324 genes. KEGG and Gene Ontology (GO) pathway analyses indicated that these genes were mainly involved in immune regulatory pathways, glucocorticoids metabolism and nervous system functions.

2020-09-30 | GSE146971 | GEO

Effect of lactation on transcriptomic expression in bovine adipose tissue

Project description:The objective was to study the transcriptomic changes in adipose tissue in the early stages of lactation, specifically in Bos Taurus, Holstein dairy cattle as a function of milk production and genetic merit. Chip quality backgrounds averaged below 50 units, and 3'/5' bias on control genes < 2.0. Correlations among replicates were > 0.85. The design was a simple paired sampling, with time (30 d prepartum and 14 d postpartum as the sampling times. There was no dietary manipulation. Animals were all first calving Holstein heifers, all raised on the same farm on the same diet

2010-05-27 | E-GEOD-21535 | biostudies-arrayexpress

Heterotrophic granules in synthetic dairy effluents

Project description:Heterotrophic granules in synthetic dairy effluents Raw sequence reads

| PRJNA532854 | ENA