Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Transcriptome profile of C2C12 wild-type and Fam134b knockout myoblasts and differentiated myotubes

ABSTRACT: Transcriptome profile of C2C12 wild-type and Fam134b knockout myoblasts and differentiated myotubes

PROVIDER: PRJNA1072140 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR27841553.fastq.gz	Fastqsanger.gz
	SRR27841554.fastq.gz	Fastqsanger.gz
	SRR27841555.fastq.gz	Fastqsanger.gz
	SRR27841556.fastq.gz	Fastqsanger.gz
	SRR27841557.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 16

Similar Datasets

LaminB1 DamID in undifferentiated mouse C2C12 myoblasts (ATCC, Lot 59501261) and differentiated C2C12 myotubes

Project description:Maps of genomic regions in proximity to the nuclear lamina were determined in undifferentiated C2C12 myoblasts (MBs) and 6 day differentiated C2C12 myotubes (MTs) using DamID with a Dam-Lamin B1-encoding lentivirus.

2016-06-17 | GSE80328 | GEO

lncRNA expression in C2C12 myoblasts and myotubes

Project description:To determine the lncRNA expression profile in C2C12 myoblasts and myotubes, we used mouse lncRNA microarray from Arraystar to examine the expression of lncRNAs in C2C12 myoblasts and myotubes.

2020-02-18 | GSE101499 | GEO

circRNA expression in C2C12 myoblasts and myotubes

Project description:To determine the circRNA expression profile in C2C12 myoblasts and myotubes, we used mouse circRNA microarray from Arraystar to examine the expression of circRNAs in C2C12 myoblasts and myotubes.

2021-03-19 | GSE112014 | GEO

Genome-wide DNA methylation sequencing in C2C12 myoblasts and myotubes

Project description:We show the application of 5mC antibody-based methylated DNA immunoprecipitation followed sequencing technology for high-through profiling of DNA methylation in mouse C2C12 myoblasts and myotubes. By analyzing the methylation status of immunoprecipitated DNA fragments, we generated genome-wide DNA methyaltion maps in mouse C2C12 myoblasts and myotubes. We find that DNA methylation levels in myoblasts at rDNA promter and coding regions are higher than that in myotubes but not changed in intergenic regions.

2019-11-27 | GSE141047 | GEO

circRNA expression in C2C12 myoblasts and myotubes

Project description:circRNA expression in C2C12 myoblasts and myotubes

| PRJNA438957 | ENA

mRNA-sequencing of C2C12 myoblasts, myotubes, and reserve cells

Project description:The transcriptome of C2C12 myoblasts, myotubes, and reserve cells were assessed by mRNA-sequencing. Our data reveals the difference in the transcriptional profiles of three different types of muscle cells.

2021-09-08 | GSE183521 | GEO

RNA-seq for transcriptome analysis in myoblasts, myotubes and osteoblasts trans-differentiated from C2C12 myoblasts

Project description:RNA-seq for transcriptome analysis in myoblasts, myotubes and osteoblasts trans-differentiated from C2C12 myoblasts

| PRJNA491439 | ENA

Transcriptome changes during the differentiation of myoblasts into myotubes

Project description:This study aimed to interrogate the interrelationship between 3D genome organization and global gene expression during muscle development using a mouse C2C12 cell line as an in vitro model. The C2C12 cell line is a well-established and extensively studied in vitro model derived from serial passage of myoblasts cultured from the thigh muscle of C3H mice after a crush injury. C2C12 cells divide when mitogens are present in the culture medium and spontaneously differentiate into muscle-like multinucleated (myotubes) cells if the medium is depleted of mitogens (i.e. serum; (Bischoff 1986)). C2C12 cells were either harvested as: 1) proliferating myoblasts (Myoblasts); 2) myotubes that were not treated with AraC (as such these myotubes contained myoblasts) - Myotubes(Day3); or 3) myotubes which were treated with AraC (myoblasts were largely depleted from these myotube cultures; Myotubes(Day7+AraC).

2017-04-07 | GSE84158 | GEO

Transcriptome profile of C2C12 wild-type and Fam134b knockout myoblasts and differentiated myotubes

Project description:To evaluate the effect of Fam134b absence we performed transcriptomic analysis on undifferentiated and differentiated myotubes

2024-12-28 | GSE254885 | GEO

mRNA-sequencing of C2C12 myoblasts, myotubes, and reserve cells

Project description:mRNA-sequencing of C2C12 myoblasts, myotubes, and reserve cells

| PRJNA761115 | ENA