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ABSTRACT: Transcriptomic profiling of Eurasian perch (Perca fluviatilis) larvae obtained with either fresh or cryopreserved sperm

PROVIDER: PRJNA1073695 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR27883887_1.fastq.gz	Fastqsanger.gz
	SRR27883887_2.fastq.gz	Fastqsanger.gz
	SRR27883888_1.fastq.gz	Fastqsanger.gz
	SRR27883888_2.fastq.gz	Fastqsanger.gz
	SRR27883889_1.fastq.gz	Fastqsanger.gz

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Project description:Transcriptomic profiling of Eurasian perch (Perca fluviatilis) larvae obtained with either fresh or cryopreserved sperm

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Subtle transcriptomic response of Eurasian perch (Perca fluvatilis) associated with Triaenophorus nodulosus plerocercoid infection

Project description:Determining the physiological effects of parasites and characterizing genes involved in host responses to infections are essential to improving our understanding of host-parasite interactions and their ecological and evolutionary consequences. This task, however, is complicated by high diversity and complex life histories of many parasite species. The use of transcriptomics in the context of wild-caught specimens can help ameliorate this by providing both qualitative and quantitative information on gene expression patterns in response to parasites in specific host organs and tissues. Here, we evaluated the physiological impact of the widespread parasite, the pike tapeworm (Triaenophorus nodulosus), on its second intermediate host, the Eurasian perch (Perca fluviatilis).

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Project description:Genomics of humic adaptation in Eurasian perch (Perca fluviatilis)

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Project description:Transcriptomic profiling of freshly hatched larvae of Eurasian perch (Perca fliviatilis)

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Project description:Gene expression in eggs is influenced by the domestication process in Eurasian Perch (Perca fluviatilis)

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Subtle transcriptomic response of Eurasian perch (Perca fluvatilis) associated with Triaenophorus nodulosus plerocercoid infection

Project description:Subtle transcriptomic response of Eurasian perch (Perca fluvatilis) associated with Triaenophorus nodulosus plerocercoid infection

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Transcriptome analysis reveals key gene expression changes in blue catfish sperm in response to cryopreservation

Project description:Cryopreservation of blue catfish sperm can cause variable embryo hatch rates, which is the limiting factor for hybrid catfish breeding. In this study, we investigated gene expression changes caused by cryopreservation using transcriptome profiles of fresh sperm samples and cryopreserved sperm from the same set of blue catfish.

2022-06-26 | GSE204687 | GEO

Female Reproductive Impacts of Dietary Methylmercury in Yellow Perch (Perca flavescens) and Zebrafish (Danio rerio)

Project description:This study sought to evaluate the effects of dietary MeHg exposure on adult female yellow perch (Perca flavescens) and zebrafish (Danio rerio) reproduction by relating controlled exposures with subsequent reproductive effects. Yellow perch were used in the study for their socioeconomic and ecological importance within the Great Lakes basin, and the use of zebrafish allowed for a detailed analysis of the molecular effects of MeHg. MeHg exposures at environmentally relevant levels were done in zebrafish for a full life cycle, mimicking a realistic exposure scenario, and in adult yellow perch for twenty weeks, capturing early seasonal ovarian development. In zebrafish, several genes involved in reproductive processes were shown to be dysregulated by RNA-seq and QPCR, but no significant phenotypic or physiological changes were observed with ovarian staging, fecundity, or embryo mortality. Yellow perch did not appear to be affected by MeHg, either at a molecular level, as assessed by QPCR of eight genes in the pituitary, liver, and ovary tissue, or a physiological level, as seen with ovarian somatic index, circulating estradiol, and ovarian staging. Lack of impact in yellow perch limits the usefulness of zebrafish as a model and suggests that the reproductive sensitivity to environmentally relevant levels of MeHg differs between yellow perch and zebrafish.

2018-01-01 | GSE73615 | GEO

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