Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Whole genome sequencing of Streptococcus pyogenes (Group A Streptococcus, GAS) M1 isolates associated with a 2022-23 surge in infections in Iceland and Scotland

PROVIDER: PRJNA1076228 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR27958600_1.fastq.gz	Fastqsanger.gz
	SRR27958600_2.fastq.gz	Fastqsanger.gz
	SRR27958700_1.fastq.gz	Fastqsanger.gz
	SRR27958700_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 646

Similar Datasets

Project description:Invasive Group A Streptococcus infections (Streptococcus pyogenes) in Iceland, 2022-2023

| PRJEB62874 | ENA

Whole genome transcritptional comparison of Group A Streptococcus (Streptococcus pyogenes) serotype M1 pre-epidemic and epidemic isolates

Project description:This transcriptional analysis is a follow up to a population genomic investigation of 3615 Streptococcus pyogenes serotype M1 strains whch are responsible for an epidemic of human invasive infections (www.pnas.org/cgi/doi/10.1073/pnas.1403138111), The goal was to assess gene expression differences between predecessor pre-epidemic M1 strains and their descendent epidemic M1 strains to gain insights into the underlying genetic basis for the shift in the frequency and severity of human infections caused by these pathogenic bacteria The transcriptomes of 7 GAS M1 strains, 4 pre-epidemic and 3 epidemic, were compared at two phases of growth, mid-exponential and early-stationary, using 3 biologial replicates, to identify genes differentially expressed between the pre-epidemic and epidemic isolates with the goal of to gaining insight into the underlying genetic basis for the evolutionary emergence, increased frequency and severity of the epidemic strains relative to the pre-epidemic strains

2015-08-10 | E-GEOD-70496 | biostudies-arrayexpress

Comparative genomic hybridization of disease causing strains of Streptococcus dysgalactiae ssp.

Project description:Group C Streptococcus dysgalactiae subsp. dysgalactiae (GCS) field strains causative of bovine mastitis and group C or group G Streptococcus dysgalactiae subsp. equisimilis (GCS/GGS) isolates from human infections were tested for the presence of virulence genes employing a microarray containing 220 virulence genes of S. pyogenes (GAS).

2011-05-05 | E-MEXP-3168 | biostudies-arrayexpress

Project description:Streptococcus pyogenes M1 GAS Umbrella project

| PRJNA1175669 | ENA

Proteome analysis of extracellular vesicles released from Streptococcus pyogenes

Project description:Streptococcus pyogenes (Group A Streptococcus: GAS) is a major human pathogen that causes streptococcal pharyngitis, skin and soft-tissue infections, and life-threatening conditions such as streptococcal toxic shock syndrome (STSS). A large number of virulence-related genes are encoded on GAS genomes, which are involved in host-pathogen interaction, colonization, immune invasion, and long-term survival within hosts, causing the diverse symptoms. Here, we investigated the interaction between GAS-derived extracellular vesicles and host cells in order to reveal pathogenicity mechanisms induced by GAS infection.

2021-05-17 | PXD026040 | JPOST Repository

Whole genome transcritptional comparison of Group A Streptococcus (Streptococcus pyogenes) serotype M1 pre-epidemic and epidemic isolates

2015-08-10 | GSE70496 | GEO

Streptococcus pyogenes M1 GAS hybrid genome assembly

Project description:Streptococcus pyogenes M1 GAS hybrid genome assembly

| PRJEB72847 | ENA

Streptococcus pyogenes MGAS5005: control vs heme exposure

Project description:Transcriptional profiling of Streptococcus pyogenes MGAS5005 cells comparing control untreated GAS cells with GAS cells exposed to 4uM heme for 1.5 h

2014-09-16 | GSE61415 | GEO

Identification of Distinct Impacts of CovS Inactivation on the Transcriptome of Acapsular Group A Streptococci

Project description:To determine the impact of CovS inactivation in acapsular GAS (Streptococcus pyogenes) strains

2023-04-25 | GSE230158 | GEO

Streptococcus pyogenes M1 GAS strain:SF370

Project description:Streptococcus pyogenes M1 GAS strain:SF370 Genome sequencing

| PRJNA1114622 | ENA