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Lithodes maja

ABSTRACT: Lithodes maja overview

PROVIDER: PRJNA1077065 | ENA |

REPOSITORIES: ENA

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Dataset's files

Source:

			Action	DRS
		Other
	SRR25603836_subreads.fastq.gz	Fastqsanger.gz
	SRR25603837_1.fastq.gz	Fastqsanger.gz
	SRR25603837_2.fastq.gz	Fastqsanger.gz
	SRR26073326_1.fastq.gz	Fastqsanger.gz

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The highly rearranged mitochondrial genomes of the crabs Maja crispata and Maja squinado (Majidae) and gene order evolution in Brachyura.

Project description:We sequenced the mitochondrial genomes of the spider crabs Maja crispata and Maja squinado (Majidae, Brachyura). Both genomes contain the whole set of 37 genes characteristic of Bilaterian genomes, encoded on both α- and β-strands. Both species exhibit the same gene order, which is unique among known animal genomes. In particular, all the genes located on the β-strand form a single block. This gene order was analysed together with the other nine gene orders known for the Brachyura. Our study confirms that the most widespread gene order (BraGO) represents the plesiomorphic condition for Brachyura and was established at the onset of this clade. All other gene orders are the result of transformational pathways originating from BraGO. The different gene orders exhibit variable levels of genes rearrangements, which involve only tRNAs or all types of genes. Local homoplastic arrangements were identified, while complete gene orders remain unique and represent signatures that can have a diagnostic value. Brachyura appear to be a hot-spot of gene order diversity within the phylum Arthropoda. Our analysis, allowed to track, for the first time, the fully evolutionary pathways producing the Brachyuran gene orders. This goal was achieved by coupling sophisticated bioinformatic tools with phylogenetic analysis.

| S-EPMC5481413 | biostudies-literature

Complete Genome Sequence of Burkholderia gladioli Phage Maja.

Project description:Burkholderia gladioli is a Gram-negative bacterium associated with cystic fibrosis infections. Here, we describe the genome sequence of B. gladioli phage Maja. Maja is most related to another Burkholderia phage, BcepF1, and may be a temperate phage, despite the absence of repressor or integrase homologs in its genome sequence.

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High incidence of heteroplasmy in the mtDNA of a natural population of the spider crab Maja brachydactyla.

Project description:Mitochondria are mostly inherited by maternal via, that is, only mitochondria from eggs are retained in the embryos. However, this general assumption of uniparentally transmitted, homoplasmic and non-recombining mitochondrial genomes is becoming more and more controversial. The presence of different sequences of mtDNA within a cell or individual, known as heteroplasmy, is increasingly reported in several taxon of animals, such as molluscs, arthropods and vertebrates. In this work, a considerable frequency of heteroplasmy were detected in the COI and 16S genes of the spider crab Maja brachydactyla, possibly associated to hybridisation with the congeneric species Maja squinado. This finding is a fact to keep in mind before addressing molecular analyses based on mitochondrial markers, since the assumption of maternal inheritance could lead to erroneous results. As M. brachydactyla is a commercial species, heteroplasmy is an important aspect to take into account for the fisheries management of this resource, since effective population size could be overestimated.

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An outbreak of <i>Gynanisa maja</i> (Lepidoptera: Saturniidae) larvae in the south-eastern lowveld of Zimbabwe.

Project description:The larvae of speckled emperor moths (Gynanisa maja) are important plant defoliators in savanna ecosystems of southern Africa and a valuable food resource for indigenous communities. Population explosions of G. maja larvae can negatively impact an area's primary productivity thereby altering herbivory patterns and associated ecosystem processes. Harvests of the larvae enhance socio-economic livelihoods of local people by providing a source of protein and improving household incomes. We report on a population outbreak of G. maja larvae that occurred in south-eastern Zimbabwe between December 2022 and January 2023 and discuss the ecological and social significance of the event. A total biomass weight of 5811 tons of G. maja larvae was estimated over the area of the outbreak and extensive defoliation was recorded in Colophospermum mopane trees. We could not associate the outbreak with any obvious environmental conditions and speculate that it may have been caused by subtle triggers that are not easily identified.

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