Project description:Arabipdosis thaliana (ecotype Col-0) was infected with the root pathogen Plasmodiophora brassicae. Gene expression of the host plant has been analyzed at two time points after inoculation (10 and 23 days after inoculation) compared to the correspondend control plants.
Project description:ra03-05_clubroot - clubroot catma-2 - Characterisation of the transcriptional changes (host genes up- and down-regulated) during the P. brassicae / A. thaliana interaction. - The objective was to identify the genes up and down-regulated between susceptible and partially resistant plants. The Arabidopsis accession Bur-0 shows partial resistance against the isolate eH of P. brassicae, whereas it is susceptible against the isolate e2. The transcriptome patterns of Bur-0 plants inoculated either by isolate e2 or isolate eH were compared at one week after inoculation. A similar comparison was done on roots. The entire experiment was repeated (biological repetition) and each comparison was performed in two independent hybridisations (technical repetition). Keywords: organ comparison
