Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Role of CASZ1 in keratinocyte differentiation [CUT&RUN]

ABSTRACT: Role of CASZ1 in keratinocyte differentiation [CUT&RUN]

PROVIDER: PRJNA1087385 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR28335892_1.fastq.gz	Fastqsanger.gz
	SRR28335892_2.fastq.gz	Fastqsanger.gz
	SRR28335893_1.fastq.gz	Fastqsanger.gz
	SRR28335893_2.fastq.gz	Fastqsanger.gz
	SRR28335894_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Role of CASZ1 in keratinocyte differentiation [CUT&RUN]

Project description:Here we indentified CASZ1 as an essential regulator of the epidermal differentiation program.

2024-04-16 | GSE261527 | GEO

Role of CASZ1 in keratinocyte differentiation

Project description:Role of CASZ1 in keratinocyte differentiation

| PRJNA1087677 | ENA

Role of CASZ1 in keratinocyte differentiation [RNA-seq]

Project description:Role of CASZ1 in keratinocyte differentiation [RNA-seq]

| PRJNA1087371 | ENA

Role of CASZ1 in keratinocyte differentiation [RNA-seq]

Project description:Here we indentified CASZ1 as an essential regulator of the epidermal differentiation program.

2024-04-16 | GSE261518 | GEO

CASZ1 is essential for activation of epidermal terminal differentiation

Project description:CASZ1 is a novel and potent activator of terminal epidermal differentiation. CASZ1 knockdown inhibits transcription of the epidermal differentiation program. p63 and p300 are required to activate CASZ1 expression.

2024-02-26 | GSE241873 | GEO

Bulk Cut&run and Cut&tag

Project description:Bulk Cut&run and Cut&tag

| PRJNA686390 | ENA

MBD2 and H3K4Me3 CUT&RUN-sequencing in C2C12 cells undergoing myogenic differentiation

Project description:MBD2 genome-binding landscape was assessed by CUT&RUN-sequencing in differentiating C2C12 cells. H3K4Me3 CUT&RUN-sequencing was performed as a positive control. Negative control experiment was also performed using a rabbit isotype control monoclonal IgG.

2021-09-08 | GSE183520 | GEO

CUT&RUN HUDEP1 OE SOX6-Flag

Project description:SOX6 CUT&RUN on HUDEP1 over expressing SOX6-Flag. The experiment is done using and anti Flag Ab to assist the genome wide binding profile of SOX6 in HUDEP1 (Human Umbilical cord blood-Derived Erythroid Progenitor-1).

2023-04-07 | E-MTAB-12800 | biostudies-arrayexpress

Nuclear VANGL2 inhibits mammary differentiation [CUT&RUN]

Project description:Nuclear VANGL2 inhibits mammary differentiation [CUT&RUN]

| PRJNA1067137 | ENA

Identification of chromatin states during zebrafish gastrulation using CUT&RUN and CUT&Tag

Project description:Here we describe successful implementation of CUT&RUN for profiling protein-DNA interactions in zebrafish embryos. We apply modified a CUT&RUN method to generate high resolution maps of enrichment for H3K4me3, H3K27me3, H3K9me3, and RNA polymerase II during zebrafish gastrulation. Using this data, we identify a conserved subset of developmental genes that are enriched in both H3K4me3 and H3K27me3 during gastrulation, and we demonstrate the increased effectiveness of CUT&RUN for detecting protein enrichment at repetitive sequences with reduced mappability. Our work demonstrates the power of combining CUT&RUN with the strengths of the zebrafish system to better understand the changing embryonic chromatin landscape and its roles in shaping development.

2021-06-17 | GSE178343 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data