Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Murine cecal microbiota

ABSTRACT: Murine cecal microbiota Raw sequence reads

PROVIDER: PRJNA1094629 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR28513304_1.fastq.gz	Fastqsanger.gz
	SRR28513304_2.fastq.gz	Fastqsanger.gz
	SRR28513305_1.fastq.gz	Fastqsanger.gz
	SRR28513305_2.fastq.gz	Fastqsanger.gz
	SRR28513306_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 50

Similar Datasets

murine cecal microbiota

Project description:murine cecal microbiota Raw sequence reads

| PRJNA1141105 | ENA

rat cecal microbiota LC-MSMS

Project description:Pu-erh tea has attracted increasing attention worldwide because of its special flavor and health effects, but its impact on composition and function of the gut microbiota remains unclear. The aim of this study was to investigate effects of aqueous extracts of fermented (ripe) and non-fermented (raw) Pu-erh teas on the composition and function of intestinal microbiota of rats with diet-induced obesity. We conducted a comparative metagenomic and metaproteomic investigation of the microbial communities in cecal samples taken from obese rats administrated with or without extracts of raw and ripe Pu-erh tea. By analyzing the composition and diversity of 16S rRNA amplicons and expression profiles of 814 distinct proteins, we found that, despite differences in the chemical compositions of the raw and ripe Pu-erh tea, administration of either at two different doses (0.15 and 0.40 g/Kg body weight), significantly (P<0.05) increased community diversity, and changed the composition of the cecal microbiota by increasing the relative abundances of Firmicutes and decreasing those of Bacteroidetes. Community metabolic processes including sucrose metabolism, glycolysis, syntheses of proteins, rRNA and antibiotics were significantly (P<0.05), or had a tendency (0.10<P<0.05) to be, promoted by enriching relevant enzymes. Furthermore, evidences from population, molecular and metabolic levels have shown that polyphenols of raw Pu-erh tea and their metabolites can promote potentially the growth of Akkermansia municiphila by stimulating the type II and III secretion system protein, elongation factor Tu, and glyceraldehyde-3-phosphate dehydrogenase. This study has provided new evidences for the prebiotic effects of Pu-erh tea.

2022-03-03 | PXD010972 | Pride

Chicken cecal microbiota

Project description:Chicken cecal microbiota Raw sequence reads

| PRJNA1023035 | ENA

Geese cecal microbiota

Project description:Geese cecal microbiota Raw sequence reads

| PRJNA983445 | ENA

Anser cygnoides orientalis cecal microbiota

Project description:Anser cygnoides orientalis cecal microbiota Raw sequence reads

| PRJNA821427 | ENA

16S rRNA sequencing of cecal microbiota from neonatal mice pre- and post-weaning

Project description:Neonatal mice were susceptible to cryptosporidium infection at 1- and 2-weeks of age, but were resistant to infection at 3- and 6-weeks of age. Diet and microbial changes are known to occur during the weaning transition in mice and we hypothesized that these changes in the intestinal luminal environment might influence resistance and susceptibility to cryptosporidium infection. As one part of testing this hypothesis, cecal microbiota composition was determined by 16S ribosomal RNA sequencing of DNA isolated from the cecal contents of mice at 1 week, 2 weeks, 3 weeks, and 6 weeks of age.

2020-11-03 | E-MTAB-9100 | biostudies-arrayexpress

Murine cecal contents

Project description:Murine cecal content comparative 16S amplicon sequencing

| PRJNA776696 | ENA

Cecal contents

Project description:Cecal contents Raw sequence reads

| PRJNA982439 | ENA

Cecal contents

Project description:Cecal contents Raw sequence reads

| PRJNA1168254 | ENA

Cecal chyme

Project description:Cecal chyme Raw sequence reads