Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Soil bacterial community with intervention

ABSTRACT: Soil bacterial community with intervention Raw sequence reads

PROVIDER: PRJNA1102656 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR30670662_1.fastq.gz	Fastqsanger.gz
	SRR30670662_2.fastq.gz	Fastqsanger.gz
	SRR30670663_1.fastq.gz	Fastqsanger.gz
	SRR30670663_2.fastq.gz	Fastqsanger.gz
	SRR30670664_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 64

Similar Datasets

soil bacterial community

Project description:soil bacterial community Raw sequence reads

| PRJNA721274 | ENA

Soil bacterial community

Project description:Soil bacterial community Raw sequence reads

| PRJNA721275 | ENA

Soil bacterial community

Project description:Soil bacterial community Raw sequence reads

| PRJNA947060 | ENA

Alfalfa soil bacterial community

Project description:Alfalfa soil bacterial community Raw sequence reads

| PRJNA960924 | ENA

Rhizosphere soil bacterial community

Project description:Rhizosphere soil bacterial community Raw sequence reads

| PRJNA1192563 | ENA

Forest soil bacterial community

Project description:Forest soil bacterial community Raw sequence reads

| PRJNA429723 | ENA

C. elegans genomic response to Konza Prairie Soil bacterial environment

Project description:Here we have compared adult wildtype (N2) C. elegans gene expression when grown on different bacterial environments/fod sources in an effort to model naturally occuring nematode-bacteria interactions at the Konza Prairie. We hypothesize that human-induced changes to natural environments, such as the addition of nitrogen fertalizer, have effects on the bacterial community in soils and this drives downstream changes in the structure on soil bacterial-feeding nematode community structure. Here we have used transcriptional profiling to identify candidate genes involved in the interaction of nematodes and bacteria in nature.

2009-05-02 | GSE15923 | GEO

soil bacterial community diversity

Project description:soil bacterial diversity Raw sequence reads

| PRJNA508602 | ENA

A comprehensive study to understand the effects of climate warming, simulated by soil transplant, on soil microbial community and its feedback responses

Project description:Soil transplant serves as a proxy to simulate climate change in realistic climate regimes. Here, we assessed the effects of climate warming and cooling on soil microbial communities, which are key drivers in Earth’s biogeochemical cycles, four years after soil transplant over large transects from northern (N site) to central (NC site) and southern China (NS site) and vice versa. Four years after soil transplant, soil nitrogen components, microbial biomass, community phylogenetic and functional structures were altered. Microbial functional diversity, measured by a metagenomic tool named GeoChip, and phylogenetic diversity are increased with temperature, while microbial biomass were similar or decreased. Nevertheless, the effects of climate change was overridden by maize cropping, underscoring the need to disentangle them in research. Mantel tests and canonical correspondence analysis (CCA) demonstrated that vegetation, climatic factors (e.g., temperature and precipitation), soil nitrogen components and CO2 efflux were significantly correlated to the microbial community composition. Further investigation unveiled strong correlations between carbon cycling genes and CO2 efflux in bare soil but not cropped soil, and between nitrogen cycling genes and nitrification, which provides mechanistic understanding of these microbe-mediated processes and empowers an interesting possibility of incorporating bacterial gene abundance in greenhouse gas emission modeling.

2013-10-30 | GSE51592 | GEO

Soil bacterial community of Cistanche salsa

Project description:Soil bacterial community of Cistanche salsa Raw sequence reads

| PRJNA633335 | ENA