Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: RNA and Reseq sequence of Sjaponicum

PROVIDER: PRJNA1105186 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR28817707_1.fastq.gz	Fastqsanger.gz
	SRR28817707_2.fastq.gz	Fastqsanger.gz
	SRR28817708_1.fastq.gz	Fastqsanger.gz
	SRR28817708_2.fastq.gz	Fastqsanger.gz
	SRR28817709_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 98

Similar Datasets

Project description:Zingiber reseq

| PRJNA827347 | ENA

Project description:Chrysanthemum nankingense reseq

| PRJNA787776 | ENA

Project description:bLactam evo reseq

| PRJNA987045 | ENA

Project description:tomato F2 ( sglaxM82 ) reseq

| PRJNA902481 | ENA

AUD Biomarkers Study (Proteomic and Genomic Analysis of Biospecimens)

Project description:Study purpose: to explore the entire spectrum of proteomic and genomic changes (amongst others) involved in diseases and in healthy/control populations. The Study is designed to discover biomarkers, develop and validate diagnostic assays, instruments and therapeutics as well as other medical research. Specifically, researchers may analyze proteins, RNA, DNA copy number changes, including large and small (1,000-100,000 kb) scale rearrangements, transcription profiles, epigenetic modifications, sequence variation, and sequence in both diseased tissue and case-matched germline DNA from Subjects.

| 62369 | ecrin-mdr-crc

SARS-CoV-2 -1 PRF RNA Pull Down and SFL Pull Down

Project description:To identify the protein partners of SARS-CoV-2 -1 PRF RNA, we performed RNA pull-down assays using streptavidin magnetic beads. To obtain more accurate and reliable data, tRSA sequence-tagged -1 PRF and -1 FSE RNA probes were both used to capture binding proteins in our screen. As a random sequence control for nonspecificity, the equivalent proteins extracted from H1299 cells were incubated with tRSA-labeled -1 PRF and -1 FSE RNA probes. A high-throughput technology, LC/MS-MS(MS), was applied to identify the candidate interacting proteins of SARS-CoV-2 -1 PRF RNA.

2023-05-25 | PXD042504 |

Project description:Reseq of the wild cottons (Gossypium hirsutum) of Mound Key, Florida

| PRJNA1086501 | ENA

Binding protein of IGFBP2 3'UTR with or without m6A methylation

Project description:RNA pull-down assay using 4 pairs of m6A methylated or unmethylated single-stranded RNAs carrying part of the 3′-UTR sequence of IGFBP2 (~20 bp in length) as baits, followed by mass spectrometry analysis. Each pair of RNA baits contained one of the 4 putative m6A consensus motifs in the 3′-UTR of IGFBP2

2024-01-11 | PXD048441 |

The raw iTRAQ proteomics data of Entamoeba histolytica

Project description:The raw proteomics data in the manuscript “Single-cell RNA-sequence reveals that the switching of the transcriptional profiles of cysteine-related genes alter the virulence of Entamoeba histolytica”

2020-11-24 | PXD022686 | JPOST Repository

Quantification and discovery of sequence determinants of protein per mRNA amount in 29 human tissues

Project description:We analyzed the contribution of known sequence determinants of protein synthesis and degradation and novel mRNA and protein sequence motifs that we found by association testing. In order to investigate the functional understanding of novel mRNA motifs, an RNA competitive-binding assay was developed to systematically identify motif-specific RNA binding proteins and to measure interaction strength thereof.

2019-02-20 | PXD010153 | Pride

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data