Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Pennycress Fusarium acuminatum TEF1

PROVIDER: PRJNA1111675 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR29026322.fastq.gz	Fastqsanger.gz

Items per page:

1 - 1 of 1

Similar Datasets

Fusarium acuminatum

Project description:Fusarium acuminatum Assembly

| PRJNA771537 | ENA

Fusarium acuminatum

Project description:Fusarium acuminatum overview

| PRJNA207276 | ENA

Fusarium acuminatum strain:CHS3

Project description:Fusarium acuminatum strain:CHS3 Assembly

| PRJNA917804 | ENA

Analysis of alfalfa TMT proteome

Project description:In order to understand the important proteins in the resistance of alfalfa to Fusarium acuminatum, samples were obtained and sent to sequencing company for proteomic analysis after 0d, 3d and 13d inoculation of alfalfa with F. acuminatum

2024-07-13 | PXD053965 |

Schisandra chinensis leaves

Project description:Fusarium acuminatum causing Schisandra leaf spot disease

| PRJNA912341 | ENA

Fusarium acuminatum strain:F829

Project description:Fusarium acuminatum F829 Standard Draft genome sequencing

| PRJNA1080930 | ENA

Fusarium acuminatum strain:207A_c7_2

Project description:Fusarium acuminatum 207A_c7_2 Minimal Draft genome sequencing

| PRJNA1080894 | ENA

Fusarium acuminatum isolate:1A

Project description:Fusarium acuminatum isolate:1A Genome sequencing and assembly

| PRJNA991756 | ENA

Wheat pathogen Fusarium acuminatum CS5907 genome sequencing

Project description:Fusarium acuminatum CS5907 pathogen recovered from crown-rot infected wheat fields

| PRJEB1737 | ENA

Propelling sustainable energy: Multi-omics analysis of pennycress FATTY ACID ELONGATION 1 knockout for biofuel production

Project description:The aviation industry’s growing interest in renewable jet fuel has encouraged the exploration of alternative oilseed crops. Replacing traditional fossil fuels with a sustainable, domestically sourced crop can substantially reduce carbon emissions, thus mitigating global climate instability. Pennycress (Thlaspi arvense L.) is an emerging oilseed intermediate crop that can be grown during the offseason between maize (Zea mays) and soybean (Glycine max) to produce renewable biofuel. Pennycress is being domesticated through breeding and mutagenesis, providing opportunities for trait enhancement. Here, we employed metabolic engineering strategies to improve seed oil composition and bolster the plant's economic competitiveness. FATTY ACID ELONGATION 1 (FAE1) was targeted using CRISPR-Cas 9 gene editing to eliminate very long chain fatty acids (VLCFAs) from pennycress seed oil, thereby enhancing its cold flow properties. Through an integrated multi-omics approach, we investigated the impact of eliminating VLCFAs in developing and mature plant embryos. Our findings revealed improved cold-germination efficiency in fae1, with seedling emergence occurring up to three days earlier at 10 ºC. However, these alterations led to a trade-off between storage oil content and composition. Additionally, these shifts in lipid biosynthesis were accompanied by broad metabolic changes, such as the accumulation of glucose and ADP-glucose quantities consistent with increased starch production. Furthermore, shifts to shorter FA chains triggered the upregulation of heat shock proteins, underscoring the importance of VLCFAs in stress signaling pathways. Overall, this research provides crucial insights for optimizing pennycress seed oil while preserving essential traits for biofuel applications.

2024-11-29 | GSE283023 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data