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The effect of ZFP36L1 deficiency on gene expression in the U2OS osteosarcoma cancer cell line

ABSTRACT: The effect of ZFP36L1 deficiency on gene expression in the U2OS osteosarcoma cancer cell line

PROVIDER: PRJNA1114639 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR29124430_1.fastq.gz	Fastqsanger.gz
	SRR29124430_2.fastq.gz	Fastqsanger.gz
	SRR29124431_1.fastq.gz	Fastqsanger.gz
	SRR29124431_2.fastq.gz	Fastqsanger.gz
	SRR29124432_1.fastq.gz	Fastqsanger.gz

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The effect of ZFP36L1 deficiency on gene expression in the U2OS osteosarcoma cancer cell line

Project description:Post-transcriptional regulation of gene expression by RNA binding proteins (RBPs), one of the major classes of proteins encoded by the human genome, is well established. ZFP36L1 and its protein family members, ZFP36 and ZFP36L2, function as RBPs that primarily regulate gene expression at the post-transcriptional level by binding to adenine uridine (AU) rich elements (AREs) in the 3′ untranslated region (3′UTR) of certain mRNAs and mediating ARE-dependent mRNA decay. In this study, using CRISPR/Cas9 ZFP36L1 gene-editing, we generated ZFP36L1 deficient U2OS cellular models. The aim of the RNASeq experiment was to compare the gene expression profile in wild-type U2OS cells compared to ZFP36L1 deficient U2OS cells. Loss of functional ZFP36L1 leads to widespread changes in gene expression that are associated with dysregulation of KRAS signalling.

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