Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Detection of genetically modified organisms

PROVIDER: PRJNA1117073 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR29224200_1.fastq.gz	Fastqsanger.gz
	SRR29224200_2.fastq.gz	Fastqsanger.gz
	SRR29224300_1.fastq.gz	Fastqsanger.gz
	SRR29224300_2.fastq.gz	Fastqsanger.gz
	SRR29224201_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 372

Similar Datasets

Project description:ALF: A novel genome walking for detection of unknown/unauthorised genetically modified organisms (UGMOs)

| PRJNA377408 | ENA

Project description:major special project for cultivating new varieties of genetically modified organisms

| PRJNA725413 | ENA

Project description:major special project for cultivating new varieties of genetically modified organisms

| PRJNA843936 | ENA

Dnmt2-dependent methylomes lack biologically relevant DNA methylation patterns

Project description:Several organisms belonging to diverse animal groups have retained Dnmt2 as their only bona fide DNA methyltransferase gene. However, recent studies have shown that Dnmt2 functions as a tRNA methyltransferase, which prompted us to analyze the methylomes of Dnmt2-only organisms at single-base resolution. Using whole-genome bisulfite sequencing we show here that the genomes of Schistosoma mansoni and Drosophila melanogaster lack detectable DNA methylation patterns. Residual unconverted cytosine residues shared many attributes with bisulfite deamination artifacts and were observed at comparable levels in a Dnmt2-deficient fly strain. Furthermore, genetically modified mouse embryonic stem cells that had retained Dnmt2 as their only bona fide DNA methyltransferase gene, did not show any detectable DNA methylation patterns. Our results thus uncover fundamental differences among animal methylomes and suggest that Dnmt2-only organisms lack biologically relevant DNA methylation patterns. Whole methylome analysis of Mus musculus. One sample was analyzed containing DNA from Dnmt1-/-, Dnmt3a-/- and Dnmt3b-/- mice.

2013-05-06 | E-GEOD-42170 | biostudies-arrayexpress

Project description:RNA-seq analysis transgenic maize (NK603) and near-isogenic varieties unintented effects in genetically modified organisms

| PRJNA635274 | ENA

Omics analysis of transgenic chickens compared with non-transgenic chickens [genotypes]

Project description:To investigate food safety made from genetically modified organisms and genome editing organism, we researched the difference of the metabolic substances between wild type and transformant in chicken blood by using transcriptome, proteome and metabolome analysis. In this study, we compared the difference of gene expression between wild type and GFP hetero transformant in leukocyte extracted from 1-2 month old female chickens.

2017-07-07 | GSE100879 | GEO

Project description:Metagenome of genetically modified soybean rhizosphere soil

| PRJNA901126 | ENA

Omics analysis of transgenic chickens compared with non-transgenic chickens [gender]

Project description:To investigate food safety made from genetically modified organisms and genome editing organism, we researched the difference of the metabolic substances between wild type and transformant in chicken blood by using transcriptome, proteome and metabolome analysis. In this study, for the first basic research, we compared the difference of gene expression by sexual difference in leukocyte extracted from 1-2 month old wild type chickens.

2017-07-07 | GSE100868 | GEO

Bacillus subtilis strain:2014-3557

Project description:Genetically modified Bacillus subtilis Genome sequencing and assembly

| PRJNA576869 | ENA

Project description:Whole genome sequencing of genetically modified Eggerthella lenta

| PRJNA866504 | ENA