Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Salvia sclarea

ABSTRACT: Salvia sclarea Genome sequencing and assembly

PROVIDER: PRJNA1117084 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR29225160_1.fastq.gz	Fastqsanger.gz
	SRR29225161_1.fastq.gz	Fastqsanger.gz
	SRR29225162_1.fastq.gz	Fastqsanger.gz
	SRR29225162_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 7

Similar Datasets

Salvia sclarea

Project description:Salvia sclarea

| PRJNA1022079 | ENA

Salvia sclarea

Project description:Salvia sclarea Organism overview

| PRJNA83929 | ENA

Salvia sclarea

Project description:Salvia sclarea Transcriptome or Gene expression

| PRJNA79419 | ENA

Salvia sclarea strain:S.sclarea

Project description:Salvia sclarea strain:S.sclarea Transcriptome or Gene expression

| PRJNA219127 | ENA

A gDNA microarray for genotyping Salvia species

Project description:Salvia is an important genus from the Lamiaceae with approximately 1000 species distributed globally. Several Salvia species are commercially important because of their medicinal and culinary properties. We report the construction of the first fingerprinting array for Salvia species enriched with polymorphic and divergent DNA sequences and demonstrate the potential of this array for fingerprinting several economically important members of this genus. In order to generate the Salvia Subtracted Diversity Array (SDA), a Suppression Subtractive Hybridization (SSH) was performed between a pool of ten Salvia species and a pool of non-angiosperm and angiosperms (excluding the Lamiaceae) to selectively isolate Salvia-specific sequences. A total of 285 subtracted genomic DNA (gDNA) fragments were amplified and arrayed. DNA fingerprints were obtained for fifteen Salvia genotypes including three that were not part of the original subtraction pool. Hierarchical cluster analysis indicated that the Salvia-specific SDA was capable of differentiating closely related species of S. officinalis and S. miltiorrhiza and was also able to reveal genetic relationships consistent with geographical origins. Species-specific features were also found for S. elegans, S. officinalis, S. sclarea, S. przewalskii and S. runcinata.

2013-07-31 | E-GEOD-39403 | biostudies-arrayexpress

Hyalesthes obsoletus from Salvia sclarea

Project description:Minor cultures as hosts for vectors of extensive crop diseases: does Salvia sclarea act as a pathogen and vector reservoir for lavender decline?

| PRJEB20482 | ENA

A gDNA microarray for genotyping Salvia species

2013-07-31 | GSE39403 | GEO

RNAseq of Salvia dorisiana plant parts

Project description:RNAseq of Salvia dorisiana plant parts

2021-03-21 | GSE112263 | GEO

Genetic characterization of 'Candidatus Phytoplasma solani' in Salvia sclarea

Project description:Minor cultures as hosts for vectors of extensive crop diseases: does Salvia sclarea act as a pathogen and vector reservoir for lavender decline?

| PRJEB20481 | ENA

Salvia daiguii

Project description:Salvia daiguii Genome sequencing and assembly

| PRJNA657735 | ENA