Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Transcriptome of heart in Argopecten irradians irradians

PROVIDER: PRJNA1120245 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR29342109_1.fastq.gz	Fastqsanger.gz
	SRR29342109_2.fastq.gz	Fastqsanger.gz
	SRR29342110_1.fastq.gz	Fastqsanger.gz
	SRR29342110_2.fastq.gz	Fastqsanger.gz
	SRR29342111_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Argopecten irradians, gills, exposed to okadaic acid

Project description:Differential expression analysis of gill tissues of bay scallop (Argopecten irradians) exposed to okadaic acid at a concentration of 500 nM for 48 h.

2018-12-21 | GSE116508 | GEO

Argopecten irradians, gills, exposed to palmitoleic acid

Project description:Differential expression analysis of gill tissues of bay scallop (Argopecten irradians) exposed to palmitoleic acid at a concentration of 80 mg/L for 48 h.

2019-01-15 | GSE121110 | GEO

Argopecten irradians, gills, exposed to Thiazolidinedione derivatives 49

Project description:Differential expression analysis of gill tissues of bay scallop (Argopecten irradians) exposed to Thiazolidinedione derivatives 49 at a concentration of 0.64 μM for 48 h.

2019-09-18 | GSE133024 | GEO

Argopecten irradians irradians x Argopecten purpuratus

Project description:Argopecten irradians irradians x Argopecten purpuratus overview

| PRJNA558123 | ENA

Argopecten irradians

Project description:Argopecten irradians Eye Transcriptome

| PRJNA82405 | ENA

Argopecten irradians irradians

Project description:Argopecten irradians irradians Transcriptome or Gene expression

| PRJNA176183 | ENA

Transcriptome analysis of adductor muscle color in Boihai Red Scallop

Project description:Boihai Red is new strains of inter-specific hybridizing the bay scallop (Argopecten irradians irradians) with the Peruvian scallop (Argopecten purpuratus). Orange color variant of adductor muscle have been developed through successive selective breeding in this strain. In the present study, transcriptomic was conducted on orange and white adductor muscle tissues. Transcriptomic analysis showeds 416 differentially expressed genes (DEGs) were identified between white and orange adductor muscle tissues in Boihai Red Scallop, with 216 up regulated and 200 down. In DEGs, apolipophorin, CYP450 and tyrosinase were expressed highly in orange adductor muscle tissues, which related to carotenoids or melanin. It is probable that not only carotenoids, but also melanin act on orange color of adductor muscle. This study provides valuable genetic resources for understanding underlying mechanisms and pathways of adductor muscle color.

2019-04-15 | GSE122451 | GEO

proteome analysis adductor muscle color in Boihai Red Scall

Project description:Boihai Red is new strains of inter-specific hybridizing the bay scallop (Argopecten irradians irradians) with the Peruvian scallop (Argopecten purpuratus). Orange color variant of adductor muscle have been developed through successive selective breeding in this strain. In the present study,proteomic were conducted on orange and white adductor muscle tissues.Notably, 74 differentially expressed proteins (DEPs) were identified by lable free proteomics, including 36 up and 38 down regulated. In DEGs, apolipophorin, CYP450 and tyrosinase were expressed highly in orange adductor muscle tissues, which related to carotenoids or melanin. In DEPs, high expression of VPS and TIF in orange adductor muscle tissues indicated that proteins outside the carotenoid pathway might also affect carotenoid biosynthesis. In addition, RAB11A related to melanin was also expressed highly in orange adductor muscle tissues at protein level. It is probable that not only carotenoids, but also melanin act on orange color of adductor muscle. This study provides valuable genetic resources for understanding underlying mechanisms and pathways of adductor muscle color.

2019-11-12 | PXD011708 | Pride

Argopecten irradians

Project description:Argopecten irradians Transcriptome or Gene expression

| PRJNA994295 | ENA

Argopecten irradians

Project description:Argopecten irradians Transcriptome or Gene expression

| PRJNA475138 | ENA