Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Arbuscular mycorrhizal fungal diversity in agricultural fields

ABSTRACT: Arbuscular mycorrhizal fungal diversity in agricultural fields Raw sequence reads

PROVIDER: PRJNA1122197 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR29348800_1.fastq.gz	Fastqsanger.gz
	SRR29348800_2.fastq.gz	Fastqsanger.gz
	SRR29348801_1.fastq.gz	Fastqsanger.gz
	SRR29348801_2.fastq.gz	Fastqsanger.gz
	SRR29348802_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 198

Similar Datasets

Arbuscular mycorrhizal fungal communities

Project description:Dispersal of arbuscular mycorrhizal fungi

| PRJNA783165 | ENA

Gene expression data from arbuscular mycorrhizal and phosphate-treated Medicago truncatula roots.

Project description:Arbuscular mycorrhiza (AM) interactions between plants and Glomeromycota fungi primarily support phosphate aquisition of most terrestrial plant species. To unravel gene expression in Medicago truncatula root colonization by AM fungi, we used genome-wide transcriptome profiling based on whole mycorrhizal roots. We used GeneChips to detail the global programme of gene expression in response to colonization by arbuscular mycorrhizal fungi and in response to a treatment with phosphate and identified genes differentially expressed during this process. Medicago truncatula roots were harvested at 28 days post inoculation with the two different arbuscular mycorrhizal fungi Glomus intraradices (Gi-Myc) and Glomus mosseae (Gm-Myc) under low phosphate conditions (20 µM phosphate) or after a 28 days treatment with 2 mM phosphate in the absence of arbuscular mycorrhizal fungi (2mM-P). As a control, uninfected roots grown under low phosphate conditions (20 µM phosphate) were used (20miM-P). Three biological replicates consisting of pools of five roots were used for RNA extraction and hybridization on Affymetrix GeneChips.

2011-10-28 | E-GEOD-32208 | biostudies-arrayexpress

Effects of arbuscular mycorrhizal symibiosis on gene expression in the foxtail millet roots

Project description:To investigate the involvement of arbuscular mycorrhizal symbiosis in the moleular regulation in foxtail millet roots and the effects of genetic variation on AMS-mediated molecular regulation, we isolated total RNA from the roots of 3 different landraces for comprehensive transcriptomic analysis. We then performed gene expression profiling analysis using data obtained from RNA-seq of 3 different landraces (Hanevalval, TT8, ICE36) after 6-week mock or arbuscular mycorrhizal fungi treatments.

2022-10-20 | GSE213843 | GEO

Gene expression data from arbuscular mycorrhizal and phosphate-treated Medicago truncatula roots.

2011-10-29 | GSE32208 | GEO

Gene expression during early stages of arbuscular mycorrhizal root formation in Medicago truncatula.

2012-03-28 | GSE34617 | GEO

Arbuscular mycorrhizal fungi

Project description:Arbuscular mycorrhizal fungi Raw sequence reads

| PRJNA722585 | ENA

Arbuscular mycorrhizal fungi

Project description:Arbuscular mycorrhizal fungi Genome sequencing and assembly

| PRJNA800455 | ENA

Global diversity of arbuscular mycorrhizal fungi