Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Wheat rhizosphere

ABSTRACT: Wheat rhizosphere Raw sequence reads

PROVIDER: PRJNA1126017 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR29488225_1.fastq.gz	Fastqsanger.gz
	SRR29488225_2.fastq.gz	Fastqsanger.gz
	SRR29488226_1.fastq.gz	Fastqsanger.gz
	SRR29488226_2.fastq.gz	Fastqsanger.gz
	SRR29488227_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 8

Similar Datasets

Wheat rhizosphere

Project description:Wheat rhizosphere Raw sequence reads

| PRJNA1124597 | ENA

Wheat rhizosphere soil

Project description:Wheat rhizosphere soil Raw sequence reads

| PRJNA1108007 | ENA

Wheat rhizosphere fungi

Project description:Wheat rhizosphere fungi Raw sequence reads

| PRJNA1082617 | ENA

WHEAT RHIZOSPHERE AND TISSUES

Project description:WHEAT RHIZOSPHERE AND TISSUES Raw sequence reads

| PRJNA576298 | ENA

Wheat rhizosphere soil ITS sequences

Project description:Wheat rhizosphere soil ITS sequences Raw sequence reads

| PRJNA1124615 | ENA

Wheat Rhizosphere

Project description:Wheat Rhizosphere Metagenome

| PRJNA744730 | ENA

Metaproteomic datasets of wheat rhizosphere from saline and non-saline soils

Project description:We present metaproteome data from wheat rhizosphere from saline and non-saline soil. For collection and acquisition of metaproteome from wheat rhizosphere under saline and normal conditions, a survey was conducted in regions of Haryana, India. Samples from 65 days old plants (wheat var HD2967) were collected and pooled and based on EC,saline (NBAIM B; EC 6mS cm-1; pH 9.0; Bhaupur 2, Haryana, INDIA; 29°19'8"N;76°48'53"E) and normal soil samples (NBAIM C; EC 200 uS cm-1; pH 7.2; Near Nainform, Haryana, INDIA; 29°19'8"N;76°48'53"E) were selected for isolation of proteome with the standardized protocol at our laboratory followed by metaproteome analysis with the standardized pipepline. In total 1538 and 891 proteins were obtained from wheat rhizosphere from saline and non-saline respectively with the given parameters and software. Among 1410 proteins unique for saline soil, proteins responsible for glycine, serine and threonine metabolism and arginine and proline biosynthesis were found in saline and absent in non-saline. The present study extends knowledge about the physiology and adaptations of the wheat rhizosphere associated microbiota under saline soil.

2024-01-08 | PXD015387 | Pride

Multi-omics of the rhizosphere communities of wheat - Part 2

Project description:characterization of rhizosphere communities of wheat with metagenomics, metaproteomics and proteomic SIP

2018-11-30 | PXD011892 | Pride

Maize rhizosphere

Project description:Wheat rhizosphere Raw sequence reads

| PRJNA1124608 | ENA

Wheat rhizosphere metatranscriptomics

Project description:Wheat rhizosphere metatranscriptomics

| PRJEB2451 | ENA