Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Whole genome methylome and transcriptome study of tree shrew brains [RNA-seq]

ABSTRACT: Whole genome methylome and transcriptome study of tree shrew brains [RNA-seq]

PROVIDER: PRJNA1126185 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Whole genome methylome and transcriptome study of tree shrew brains [RNA-seq]

Project description:To understand the regulatory impact of DNA methylation on regulation of gene expression and X chromosome, we examined genome-wide DNA methylationand gene expression from female and male tree shrew brains.

2024-11-01 | GSE270313 | GEO

Whole genome methylome and transcriptome study of tree shrew brains [BiSulfite-seq]

2024-11-01 | GSE270314 | GEO

Whole genome methylome and transcriptome study of tree shrew brains [BiSulfite-seq]

Project description:Whole genome methylome and transcriptome study of tree shrew brains [BiSulfite-seq]

| PRJNA1126184 | ENA

Transcriptome sequencing of Chinese tree shrew, Tupaia belangeri chinensis

Project description:Deep sequencing of mRNA from Chinese tree shrew; Chinese tree shrew (Tupaia belangeri chinensis) is placed in Order Scandentia and embraces many unique features for a good experimental animal model. Currently, there are many attempts to employ tree shrew to establish model for a variety of human disorders such as social stress, myopia, HCV and HBV infection, and hepatocellular carcinoma .We present here a publicly available annotated genome sequence for Chinese tree shrew. Phylogenomic analysis of tree shrew and other mammalians highly supported its close affinity to primates. Characterization of key factors and signaling pathways of the nervous and immune systems in tree shrews showed that this animal had common and unique features, and had essential genetic basis for being a promising model for biomedical researches. Analysis of ploy(A)+ RNA of different specimens:kidney, pancreas, heart, liver, brain, testis and ovary form Chinese tree shrew

2013-01-14 | E-GEOD-39150 | biostudies-arrayexpress

Transcriptome sequencing of Chinese tree shrew, Tupaia belangeri chinensis

2013-01-14 | GSE39150 | GEO

Characterization of long-term ex vivo expansion of tree shrew spermatogonial stem cells

Project description:Purpose: The goals of this study are to clarify influence of long-term expansion on the spermatogenesis potential of tree shrew spermatogonial stem cells （SSCs）

2023-04-06 | GSE228744 | GEO

DNA methylome of tea tree

Project description:Bisulfite treatment libraries were made to characterize the DNA methylome of tea tree

2018-09-15 | GSE119992 | GEO

Gene expression profile at single cell level from the whole brain of two tree shrew fetus

Project description:Although continual expansion of the brain during primate evolution accounts for our enhanced cognitive capabilities, the drivers of brain evolution have scarcely been explored. Tree shrews are closely related to primates that comparing their brains to primate brains at the single-cell level will provide new insights into the evolution of the primate brain.

2023-07-15 | GSE233757 | GEO

Identification of Driver Mutations for Induction of Pancreatic Cancer from Adult Tree Shrew (Tupaia belangeri chinensis) Acinar Cells

Project description:To investigate gene expression in the tree shrew pancreatic cancer model, tumor samples were analyzed by RNA-seq and the expression profiles were compared to those of human pancreatic cancer samples (n = 30) containing KRAS, TP53, and CDKN2A/B mutations downloaded from The Cancer Genome Atlas (https://tcga-data.nci.nih.gov/) and mouse pancreatic cancer (accession no. GSE87388), which showed similar histological features

2018-10-30 | GSE106343 | GEO

DNA methylome of tea tree

Project description:DNA methylome of tea tree

| PRJNA491190 | ENA