Project description:Investigation of whole genome gene expression level changes in a E. coli fatty acid overproducing strain with or without heterologous expression of the M. luteus FabH. The strain expressing M. luteus FabH produces more methyl ketones. This study will be further described in Goh, E.B., E.E.K. Baidoo, J.D. Keasling, and H.R. Beller. Engineering of bacterial methyl ketone synthesis for biofuels.

2012-01-26 | GSE32561 | GEO

Bacillus velezensis strain:GDMCC 820630

Project description:Bacillus velezensis strain:GDMCC 820630 Genome sequencing

| PRJNA1162774 | ENA

Gene expression changes in Suillus luteus- Pinus sylvestris ectomycorrhizal roots compared to Suillus luteus free-living mycelium

Project description:Illumina HiSeq technology was used to generate mRNA profiles from Suillus luteus ectomycorrhizal roots compared to free-living mycelium . Mycorrhizal roots were harvested after 40 days, pooled and used for RNA extraction. Reads of 2X100bp were generated and aligned to Suillus luteus (http://genome.jgi-psf.org/Suilu1/Suilu1.home.html) using CLC Genomics Workbench 6. mRNA profiles from Suillus luteus ectomycorrhizal roots and free-living mycelium were generated by paired-end (2x100bp) Illumina HiSeq2000 sequencing. Two biological replicates were sequenced for mycorrhizal and mycelium samples.

2015-02-06 | E-GEOD-63926 | biostudies-arrayexpress

Roseimaritima sediminicola strain:JC651

Project description:Roseimaritima sediminicola strain:JC651 Genome sequencing and assembly

| PRJNA579276 | ENA

Pelagibacterium sediminicola strain:IMCC34151

Project description:Pelagibacterium sediminicola strain:IMCC34151 Genome sequencing and assembly

| PRJNA477744 | ENA

Cereibacter sediminicola strain:JA983

Project description:Cereibacter sediminicola strain:JA983 Genome sequencing and assembly

| PRJNA545476 | ENA

Paracoccus sediminicola strain:SCSIO 76264

Project description:Paracoccus sediminicola strain:SCSIO 76264 Genome sequencing