Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Organic trace elements for Chinese broilers

PROVIDER: PRJNA1138418 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR29907400_1.fastq.gz	Fastqsanger.gz
	SRR29907400_2.fastq.gz	Fastqsanger.gz
	SRR29907401_1.fastq.gz	Fastqsanger.gz
	SRR29907401_2.fastq.gz	Fastqsanger.gz
	SRR29907402_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 96

Similar Datasets

Project description:Effects of substituting inorganic trace elements with organic trace elements on gut microbiota of finishing pigs

| PRJNA1170518 | ENA

Influence of trace-elements and glucose on Trichophyton rubrum grown in keratin medium

Project description:Trichophyton rubrum is a pathogenic fungus infecting human skin, hairs and nails. These substrates are low in most nutrients required for fungal growth and consequently are colonized only by very few fungal species. Especially, concentration of trace elements is low and a limiting factor for fungal growth. T. rubrum is a highly specialist fungus and adapted to this environment. By in-vitro experiments, we analyzed the influence of trace-elements on mRNA expression. We measured gene expression by RNAseq of two T. rubrum strains, STRB008 and STRB012, in three different cultivation condition, each in 6 replications. Keratin medium, without sugar supply, was used as basic medium. In the second condition, we added trace-elements to the keratin medium. In the third condition, we added glucose. We point to the evolutionary adaption of the fungus to the human skin. T. rubrum has a sophisticated system for the digestion and utilization of human skin protein and a relative low demand for trace-elements.

2024-12-14 | GSE252022 | GEO

Project description:Study of trace elements soil functioning, focus bacterial community

| PRJNA918629 | ENA

Project description:Impact of Nitrate and Sulfate on Trace Organic Biotransformation

| PRJNA844921 | ENA

Project description:Catabolic degradation of trace organic chemicals in activated sludge

| PRJNA1160004 | ENA

Trace elements and lipidomic datasets of stranding samples in the blubber of Turpsios truncatus from the Yucatan Coast: Association with biological features

Project description:Trace elements are the result of natural and anthropogenic sources. Some of them are toxic causing alterations in the properties of membranes and produce lipid peroxidation. The dataset presented here is associated with the research article paper entitled “Trace element and lipidomic analysis of bottlenose dolphin blubber from the Yucatan coast: Lipid composition relationships”. In this article, we presented the trace element concentrations found in blubber and their comparison with other studies. Lipidomic characterization of bottlenose dolphin blubber and their association with trace elements and the differences related to biological characteristics. This data provides a correlation analysis between trace element concentrations and lipid species related to biological characteristics. We used Spearman correlation analysis to identify the association with body length and Wicolxon rank-sum test to determine differences in lipids related to stranding code, growth stage and stomach content. The data indicates that Cr, Cd and Zn concentrations were higher compared to other studies. Cr, Co, As and Cd were found in higher concentration in larger organisms. A decrease in some ceramides, sterols, glycerolipids and phosphatydilglyceros related to higher dolphins were found. Decomposition causes a decrease in phosphoethanolamines. Organisms with empty stomachs showed higher concentrations of phosphoethanolamines suggesting a preferential metabolism of energy-rich lipids over structural lipids. The information in these datasets may contribute to understanding the potential associations of trace element, lipid and their associations with biological characteristics.

2022-10-24 | MTBLS5772 | MetaboLights

Project description:Trace elements supplemented in mesophilic anaerobic digestion of food waste

| PRJNA843129 | ENA

Olfactory expression of trace amine-associated receptors requires cooperative cis-acting enhancers

Project description:Our study shows reduced expression of Trace-Amine Associated Receptors (TAARs) in the olfactory epithelium of mice in which Taar elements 1 and 2 (TE1+2) are deleted in cis.

2021-04-01 | GSE171241 | GEO

Differentially expressed genes in livers and abdominal fats between normal- and high-fat diet-fed chickens

Project description:To investigate genes involved in abdominal fat deposition and fat metabolism of broilers, we used highthroughput sequencing to detect the differentially expressed genes in livers and abdominal fats of broilers which were fed with a normal diet and a high-fat diet, respectively. The broilers began to fed with a normal or a high-fat diet in 1-week-old. After 7 weeks, the broilers were be executed and the livers and abdominal fats were used to extracted total RNAs. Finally, the total RNAs were be sequenced used BGISEQ-500 platform.

2019-03-16 | GSE128340 | GEO

Differentially expressed genes in livers and abdominal fats between normal- and high-fat diet-fed dwarf broilers

Project description:To investigate genes involved in abdominal fat deposition and fat metabolism of broilers with dw gene, we used highthroughput sequencing to detect the differentially expressed genes in livers and abdominal fats of dwarf broilers which were fed with a normal diet and a high-fat diet, respectively. The broilers began to fed with a normal or a high-fat diet in 1-week-old. After 7 weeks, the broilers were be executed and the livers and abdominal fats were used to extracted total RNAs. Finally, the total RNAs were be sequenced used BGISEQ-500 platform.

2019-04-16 | GSE129840 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data