Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: cold treat Arabidopsis sample sequencing

PROVIDER: PRJNA1139324 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR29972715.fastq.gz	Fastqsanger.gz
	SRR29972716.fastq.gz	Fastqsanger.gz
	SRR29972717.fastq.gz	Fastqsanger.gz
	SRR29972725.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

Project description:Cold treat maize sample sequencing

| PRJNA686250 | ENA

Project description:NCBI treat maize sample sequencing

| PRJNA718641 | ENA

Project description:NaCl treat maize sample sequencing

| PRJNA704103 | ENA

Project description:Nacl treat maize sample sequencing

| PRJNA513009 | ENA

Project description:KH2PO4 treat maize sample sequencing

| PRJNA687182 | ENA

Project description:drought treat Arabidopsis thaliana sequencing

| PRJNA513117 | ENA

Genome-wide profiling of small RNAs in Arabidopsis seedlings under salt and cold stresses

Project description:To identify novel miRNA and NAT-siRNAs that are associated with salt and cold stresses in Arabidopsis, we generated small RNA sequences from Arabidopsis plants under salt and cold stress treatments. Sequencing of small RNAs in Arabidopsis under salt, and cold stress conditions.

2012-03-12 | E-GEOD-33642 | biostudies-arrayexpress

Genome-wide profiling of small RNAs in Arabidopsis seedlings under salt and cold stresses

2012-03-12 | GSE33642 | GEO

Genome-wide profiling of small RNAs in Arabidopsis under abiotic stresses

Project description:To identify novel miRNA and NAT-siRNAs that are associated with abiotic stresses in Arabidopsis, we generated small RNA sequences from adult Arabidopsis plants under control and under dought, salt, and cold stress treatments. Over 23 million reads were generated. Sequencing of small RNAs in Arabidopsis under control, drought, salt, and cold stress conditions.

2012-03-12 | E-GEOD-26356 | biostudies-arrayexpress

RNA-seq data for Arabidopsis cbfs-1

Project description:In Arabidopsis, CBFs transcription factors (CBF1, CBF2 and CBF3) play fundamental roles in plant cold tolerance, especially in cold-acclimation. By employing CRISPR/Cas9, we knocked out CBF1 and CBF2 simultaneously in cbf3 background and generated cbfs triple mutant. This mutant facilitated the discovery of CBF-regulated genes. In this study, Arabidopsis 14-d-old Col-0 and cbfs mutant were treated with cold stress (4 degree centigrade) for 0, 3 and 24 hours. The seedlings were harvested for total RNA extraction and sequencing.

2019-05-07 | GSE130729 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data