Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Resequencing of Corylus species

PROVIDER: PRJNA1140110 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR29983726_1.fastq.gz	Fastqsanger.gz
	SRR29983726_2.fastq.gz	Fastqsanger.gz
	SRR29983727_1.fastq.gz	Fastqsanger.gz
	SRR29983727_2.fastq.gz	Fastqsanger.gz
	SRR29983728_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 122

Similar Datasets

Project description:Genome resequencing of Corylus kweichowensis and Corylus chinensis

| PRJNA1039330 | ENA

Project description:resequencing of Section Phyllochlamys, Corylus

| PRJNA899594 | ENA

Project description:Genome resequencing of Corylus Chinensis

| PRJNA1039329 | ENA

Project description:Corylus genome

| PRJNA747800 | ENA

dhCorColu

Project description:Corylus colurna

| PRJEB81051 | ENA

Tracking Ebolavirus genomic drift with a resequencing microarray

Project description:This study evaluates a resequencing microarray designed to determine the sequence of the four major genes in the Ebolavirus genome, Nucleoprotein (NP), matrix protein (VP40), glycoprotein (GP) and polymerase (L). The array has the ability to determine the sequence of five species and strains: Zaire Ebolavirus (Mayinga and Makona), Bundibugyo Ebolavirus, Sudan Ebolavirus and Tai Forest Ebolavirus.

2021-01-29 | E-MTAB-10007 | biostudies-arrayexpress

Project description:Seasonal changes of soil microbial community of four Corylus species

| PRJNA719642 | ENA

Project description:Species of Betula, Alnus and Corylus Genome sequencing and assembly

| PRJNA679451 | ENA

Laser capture microdissection and microarray analysis of ectomycorrhizas formed by the ascomycete Tuber melanosporum reveal functional heterogeneity between mantle and Hartig net compartments

Project description:The aim of this analysis was to better understand the complex symbiotic stage of Tuber melanosporum by combining the use of laser capture microdissection and microarray gene expression analysis. We isolated the fungal/soil (i.e. the mantle) and the fungal/plant (i.e. the Hartig net) interfaces from transverse sections of T. melanosporum/Corylus avellana ectomycorrhizas and identified the transcriptional landscape associated with each compartment. We compared these data to the transcriptome of ectomycorrhizal root tips, free-living mycelium and fruiting bodies of Tuber melanosporum (Series GSE17529). The T. melanosporum custom-exon expression array (4 x 72K) manufactured by Roche NimbleGen Systems Limited (Madison, WI) contained five independent, nonidentical, 60-mer probes per gene model coding sequence. Included in the oligoarray were 12,232 annotated gene models, 3,913 random 60-mer control probes and labelling controls. Sequences used for the oligonucleotide design were from an early draft of the gene catalog containing several TE families. For 1,876 gene models, technical duplicates were included on the array. We performed 6 hybridizations (NimbleGen) with samples derived from microdissected mantles (3 biological replicates) and Hartig nets ((3 biological replicates each) from T. melanosporum/Corylus avellana ectomycorrhizal root tips . All samples were labeled with Cy3.

2013-03-01 | E-GEOD-36870 | biostudies-arrayexpress

Tracking Ebolavirus genomic drift with a resequencing microarray, verification with NGS

2021-07-02 | E-MTAB-10102 | biostudies-arrayexpress