Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Testing the monophyly of Corallorhiza and Oreorchis (Epidendroideae, Epidendreae, Calypsoinae) with nuclear sequence capture

PROVIDER: PRJNA1147645 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR30234200_1.fastq.gz	Fastqsanger.gz
	SRR30234200_2.fastq.gz	Fastqsanger.gz
	SRR30234201_1.fastq.gz	Fastqsanger.gz
	SRR30234201_2.fastq.gz	Fastqsanger.gz
	SRR30234202_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 88

Similar Datasets

NG Capture-C from human erythroid and embryonic stem cells

Project description:NG Capture-C provides high resolution chromatin conformation capture (3C) interaction maps. NG Capture-C was carried out in erythroid and hESC cells at the Hba, Hbb, Myc, and Slc25a37 locus to generate sequence libraries for analytical software testing.

2020-11-02 | GSE129378 | GEO

Corallorhiza striata species complex

Project description:Corallorhiza involuta, Corallorhiza bentleyi, Corallorhiza striata var. striata, Corallorhiza striata var. vreelandii, Corallorhiza striata Sierra Nevada, Corallorhiza trifida Variation

| PRJNA431772 | ENA

Corallorhiza

Project description:Target capture of plastid genomes from the Corallorhiza striata complex Raw sequence reads

| PRJNA431795 | ENA

Corallorhiza striata

Project description:Corallorhiza striata overview

| PRJNA170094 | ENA

Corallorhiza

Project description:Whirly1 evolution in Corallorhiza

| PRJNA984634 | ENA

Nuclear-capture of endosomes drives depletion of nuclear G-actin to promote SRF/MRTF gene expression and cancer cell invasiveness

Project description:Signals are relayed from receptor tyrosine kinases (RTKs) at the cell surface to effector systems in the cytoplasm and nucleus, and coordination of this process is important for the execution of migratory phenotypes, such as cell scattering and invasion. The endosomal system influences how RTK signalling is coded, but the ways in which it transmits these signals to the nucleus to influence gene expression are not yet clear. Here we show that an RTK, MET promotes Rab17- and clathrin-dependent endocytosis of EphA2, another RTK, followed by centripetal transport of EphA2-positive endosomes. EphA2 then mediates physical capture of endosomes on the outer surface of the nucleus; a process involving interaction between the nuclear import machinery and a nuclear localisation sequence in EphA2’s cytodomain. Nuclear capture of EphA2 promotes RhoG-dependent phosphorylation of the actin-binding protein, cofilin to oppose nuclear import of G-actin. The resulting depletion of nuclear G-actin drives transcription of Myocardin-related transcription factor (MRTF)/serum-response factor (SRF)-target genes to implement cell scattering and the invasive behaviour of cancer cells.

2021-09-30 | GSE179901 | GEO

Project description:Targeted sequence capture of nuclear loci in genus Buddleja

| PRJNA419999 | ENA