Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Trachylepis brevicollis

ABSTRACT: Trachylepis brevicollis

PROVIDER: PRJNA1147695 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR30501258_1.fastq.gz	Fastqsanger.gz
	SRR30501258_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 3 of 3

Similar Datasets

Nebria brevicollis

Project description:Nebria brevicollis overview

| PRJNA853430 | ENA

Sordaria brevicollis

Project description:Sordaria brevicollis overview

| PRJNA445128 | ENA

Monosiga brevicollis

Project description:Monosiga brevicollis Genome sequencing

| PRJNA337088 | ENA

Sordaria brevicollis strain:FGSC 1904 | isolate:FGSC 1904

Project description:Sordaria brevicollis FGSC 1904 transcriptome

| PRJNA442607 | ENA

Sordaria brevicollis strain:FGSC 1904 | isolate:FGSC 1904

Project description:Sordaria brevicollis FGSC1904 Standard Draft genome sequencing

| PRJNA371213 | ENA

STING mediates immune responses in a unicellular choanoflagellate

Project description:To reconstruct the ancestry of animal innate immunity, we have developed the choanoflagellate Monosiga brevicollis, one of the closest living relatives of animals, as a model for studying mechanisms underlying pathogen recognition and immune response. We found that M. brevicollis is killed by exposure to Pseudomonas aeruginosa bacteria and selectively avoids ingesting them. Moreover, M. brevicollis expresses STING, which, in animals, activates innate immune pathways in response to cyclic dinucleotides during pathogen sensing. M. brevicollis STING increases the susceptibility of M. brevicollis to P. aeruginosa-induced cell death and is required for responding to the cyclic dinucleotide 2’3’ cGAMP. Furthermore, similar to animals, autophagic signaling in M. brevicollis is induced by 2’3’ cGAMP in a STING-dependent manner.

2021-05-13 | GSE174340 | GEO

Monosiga brevicollis single-cell amplified genomes

Project description:Is single-cell genomics a useful technique to address evolutionary questions? Insights from three Monosiga brevicollis single-cell amplified genomes

| PRJEB19365 | ENA

icNebBrev

Project description:Nebria brevicollis

| PRJEB49041 | ENA

A nitrile hydratase in the eukaryote Monosiga brevicollis.

Project description:Bacterial nitrile hydratase (NHases) are important industrial catalysts and waste water remediation tools. In a global computational screening of conventional and metagenomic sequence data for NHases, we detected the two usually separated NHase subunits fused in one protein of the choanoflagellate Monosiga brevicollis, a recently sequenced unicellular model organism from the closest sister group of Metazoa. This is the first time that an NHase is found in eukaryotes and the first time it is observed as a fusion protein. The presence of an intron, subunit fusion and expressed sequence tags covering parts of the gene exclude contamination and suggest a functional gene. Phylogenetic analyses and genomic context imply a probable ancient horizontal gene transfer (HGT) from proteobacteria. The newly discovered NHase might open biotechnological routes due to its unconventional structure, its new type of host and its apparent integration into eukaryotic protein networks.

| S-EPMC2603476 | biostudies-literature

Monosiga brevicollis

Project description:A marine Choanoflagellate

| PRJNA19069 | ENA