Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: RNA-Seq of Lactic acid bacteria under different culture conditions

PROVIDER: PRJNA1177649 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR31112559_1.fastq.gz	Fastqsanger.gz
	SRR31112559_2.fastq.gz	Fastqsanger.gz
	SRR31112560_1.fastq.gz	Fastqsanger.gz
	SRR31112560_2.fastq.gz	Fastqsanger.gz
	SRR31112561_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 24

Similar Datasets

Genome-wide transcriptional profiling of Lactobacillus acidophilus stress response

Project description:We used a whole genome array containing 97.4 % of the annotated genes of Lactobacillus acidophilus NCFM, a probiotic culture that belongs to the lactic acid bacteria group, to identify genes that are differentially expressed under several stress conditions. Keywords: Stress response

2005-12-08 | GSE2782 | GEO

Project description:Different transcriptional sequences of lactic acid bacteria and acetic acid bacteria in different culture methods

| PRJNA833267 | ENA

Project description:RNA-Seq of Lactic acid bacteria

| PRJNA1176381 | ENA

Project description:RNA-seq of lactic acid bacteria

| PRJNA574885 | ENA

Effects of acid stress on gene transcription of L.lactis strain G423

Project description:Bacteria that live in the acidic environment face number of growth-related challenges from the intracellular pH changes. In order to survive under acidic environment, Lactic acid bacteria must employ multiple genes and proteins to regulate the relative pathways.

2018-11-20 | GSE107136 | GEO

Effects of acid stress on gene transcription of L.lactis strain F44

2018-11-20 | GSE107135 | GEO

RNA-Seq of wild type yeast and several knockout strains in different chemically defined media

Project description:This experiment investigates yeast pathways involved in the secretion of metabolites that enable the growth of lactic acid bacteria. Wild-type Saccharomyces cerevisiae (S90) in different defined media, as well as four mutant yeasts with selective gene deletions, were forwarded to RNA-seq to characterise global differences in transcriptomes and identify genes/pathways with altered gene expression levels.

2017-12-01 | E-MTAB-4651 | biostudies-arrayexpress

Lactobacillales

Project description:Transcriptomic Analysis of Fecal Kimchi-Derived Lactic Acid Bacteria Under Varying Environmental Conditions

| PRJNA1172383 | ENA

Project description:lactic acid bacteria

| PRJNA933129 | ENA

Expression data from induced pluripotent stem cell-derived crypt-villus structural small intestine

Project description:We established the co-culture model of iPS cell-derived crypt-villus structural small intestine and lactic acid bacteria (LABs). Using this model, the effect of TNF-α, IFN-γ and LABs (Lactobacillus delbrueckii subsp. bulgaricus 2038 and Streptococcus thermophilus 1131) on the cells was evaluated.

2025-03-10 | GSE291253 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data