Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Metatranscriptome data in microplastics under different fertilized treatments

ABSTRACT: Metatranscriptome data in microplastics under different fertilized treatments Raw sequence reads

PROVIDER: PRJNA1212775 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

metagenomic data in microplastics under different fertilized treatments

Project description:metagenomic data in microplastics under different fertilized treatments Raw sequence reads

| PRJNA1212771 | ENA

Pollutants bioavailability and toxicological risk from microplastics to marine mussels

Project description:Microplastics represent a growing environmental concern for the oceans due to their potential capability to adsorb different classes of pollutants, thus representing a still unexplored source of exposure for aquatic organisms. In this study polystyrene (PS) microplastics were characterized for their capability to adsorb pyrene (PYR) as model compound for polycyclic aromatic hydrocarbons, and transfer this chemical to filter feeding mussels Mytilus galloprovincialis. Gene expression analyses of Mytilus galloprovincialis exposed to polystyrene (PS) microplastics and to polystyrene contaminated with pyrene (PS-PYR) have been performed trough a DNA microarray platform.

2014-12-27 | GSE57460 | GEO

Low-dose exposure to microplastics retards meiotic maturation via HDACs insufficiency

Project description:Microplastics (MPs) are considered as one of the main reasons for male and female infertility. However, the reproductive toxicity and its related mechanisms are understood by animal models with acute exposure to MPs at present. In the study, we show the low-dose polystyrene microplastics (PSMPs) exposure results in severely abnormal reproduction in female, but not male in mouse model, exhibiting failed oocyte meiotic maturation. Mechanistically, the PSMPs exposure induces the over-activation of cell metabolism pathways, insufficient HDACs and H4K16 hyperacetylation in oocytes in vivo and in vitro. By addition of HDAC3 inhibitor, the failed oocyte maturation, over-activation of cell metabolism pathways and H4K16 hyperacetylation are recapitulated, and the overexpression of HDAC3 can rescue the defects of meiotic maturation induced by PSMPs. Our observations suggest a direct link of the maturation defects induced by PSMPs to HDAC3 insufficiency. Thus, we propose the potential treatments for therapy of the failed meiotic maturation of oocyte from women highly exposed to MPs by activating or supplying HDAC3.

2024-03-06 | GSE259264 | GEO

Expression data of soybean accessions under different phosphorus treatments

2016-03-08 | GSE78242 | GEO

Transcriptome of cassava seedling under different treatments

Project description:Transcriptome of cassava seedling under different treatments

| PRJNA658570 | ENA

Expression data of soybean accessions under different phosphorus treatments

Project description:Phosphorus is one of the most important macronutrients that is required for plant growth and development. However, stress under low-P conditions has become a limiting factor that affects crop yields and qualities. Plants have developed strategies to cope with this, while few genes associated with low-P tolerance have been identified in soybean. We used microarrays to detail the global programme of gene expression under different phosphorus treatments of two soybean accessions CD and YH with different phosphorus efficiency. The roots and leaves of a low-P-tolerant accession and a low-P-sensitive accession were harvested after 10 days of hydroponics under different P treatments, each with three biological replicates.Then microarray chips were performed on the 24 samples. We sought to identify genes associated with low-P stress. To that end, we analyzed the differently expressed genes between different P treatments, different accessions and different tissues.

2016-03-08 | E-GEOD-78242 | biostudies-arrayexpress

Maize rhizosphere microbiome under different fertilization treatments

Project description:Maize rhizosphere microbiome under different fertilization treatments Assembly

| PRJNA728928 | ENA

Polyethylene terephthalate microplastics generated from disposable water bottles induce interferon signalling pathway in mouse lung epithelial cells

Project description:Polyethylene terephthalate microplastics generated from disposable water bottles induce interferon signalling pathway in mouse lung epithelial cells

2024-08-16 | GSE269348 | GEO

16s of red soil under different fertilization treatments

Project description:Bacteria in aggregates of red soil under different fertilization treatments Raw sequence reads

| PRJNA628540 | ENA

Cow milk microbiota composition under different mastitis treatments

Project description:Cow milk microbiota composition from 16S rRNA-gene sequencing: different dry-cow therapy treatments (two antibiotics, teat sealant, controls)

| PRJEB38332 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data