Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Escherichia coli str. K-12 substr. MG1655

ABSTRACT: Functional genomics study of endogenous free fatty acid overproduction in Escherichia coli

PROVIDER: PRJNA141611 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

RNA-seq analysis of Escherichia coli str. K-12 substr. MG1655

Project description:Expression profiles of wild-type and SgrR mutant E. coli strains under aMG and 2-DG-induced stress. Expression profiles of E. coli overexpressing SgrS sRNA.

2013-03-26 | GSE45443 | GEO

Escherichia coli str. K-12 substr. MG1655

Project description:Endogenous rRNA sequence variation can regulate stress response gene expression and phenotype

| PRJNA487814 | ENA

RNA-seq analysis of Escherichia coli str. K-12 substr. MG1655

Project description:Expression profiles of wild-type and SgrR mutant E. coli strains under aMG and 2-DG-induced stress. Expression profiles of E. coli overexpressing SgrS sRNA. Illumina RNA-Seq of total RNA extracted from wild-type, SgrR/SgrS mutant and SgrS overexpressing E. coli strains grown in different conditions.

2013-03-26 | E-GEOD-45443 | biostudies-arrayexpress

Escherichia coli str. K-12 substr. MG1655

Project description:Amino acid/Nucleotide perturbation in Escherichia coli

| PRJNA117083 | ENA

Transcriptomic differences between E. coli BL21 and K-12 MG1655 during n-heptanoic acid stress

Project description:Biosynthesis of carboxylic acids and fatty acids from renewable biomass is a key issue in biorefinery. However, their productivities are often limited due to various toxic effects of the products on the host organisms. Here, we have investigated the factors that influence tolerance of Escherichia coli to long chain carboxylic acid (e.g., n-heptanoic acid)-induced stress by using transcriptome analysis. The metabolic and genomic responses of E. coli BL21 and MG1655 strains with n-heptanoic acid indicated that acid stress is one of the major stresses, which might be generated by n-heptanoic acid in addition to the presumed solvent-like stress.

2016-10-11 | GSE73640 | GEO

Escherichia coli str. K-12 substr. MG1655

Project description:Transcriptomic analysis of carboxylic acid challenge in Escherichia coli: beyond membrane damage

| PRJNA230973 | ENA

Escherichia coli str. K-12 substr. MG1655

Project description:Characterisation of Modular Reponse of non-pathogenic E.coli K12 MG1655 Response to acid adaptation, part A

| PRJNA114091 | ENA

Escherichia coli str. K-12 substr. MG1655

Project description:Characterisation of Modular Reponse of non-pathogenic E.coli K12 MG1655 Response to acid adaptation, part B

| PRJNA114093 | ENA

Escherichia coli str. K-12 substr. MG1655

Project description:Expression profiling of E.coli K-12 wild-type vs. delta dksA cells upon amino acid starvation

| PRJNA122209 | ENA

Escherichia coli str. K-12 substr. MG1655

Project description:Decoding genome-wide GadEWX transcriptional regulatory networks reveals a multifaceted cellular response to acid stress in Escherichia coli [ChIP-seq]

| PRJNA276918 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data