Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Escherichia coli E110019

ABSTRACT: Atypical enteropathogenic Escherichia coli

PROVIDER: PRJNA15578 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR9418143.fastq.gz	Fastqsanger.gz
	SRR9418144.fastq.gz	Fastqsanger.gz

Items per page:

1 - 3 of 3

Similar Datasets

Enteropathogenic Escherichia Coli (EPEC): Does it Have a Role in Colorectal Tumourigenesis?

Project description:Despite the characterization of many aetiologic genetic changes. The specific causative factors in the development of sporadic colorectal cancer remain unclear. This study was performed to detect the possible role of Enteropathogenic Escherichia coli (EPEC) in developing colorectal carcinoma.

| 2184564 | ecrin-mdr-crc

The RegR virulence regulon of rabbit specific enteropathogenic Escherichia coli strain E22

Project description:To investigate the regulatory targets of the RegR virulence regulon of rabbit specific enteropathogenic Escherichia coli strain E22

2012-12-25 | GSE41093 | GEO

The RegR virulence regulon of rabbit specific enteropathogenic Escherichia coli strain E22

Project description:To investigate the regulatory targets of the RegR virulence regulon of rabbit specific enteropathogenic Escherichia coli strain E22 Single factor (genotype) with dye swaps.

2012-12-25 | E-GEOD-41093 | biostudies-arrayexpress

Psychological Evaluation According Colonic Colonization by Escherichia Coli of Patients After Colorectal Surgery

Project description:The purpose of this study is to determine whether the presence of pathogenic Escherichia coli in colon is associated with psychiatric disorders.

| 2230352 | ecrin-mdr-crc

Escherichia coli E22

Project description:Enteropathogenic Escherichia coli

| PRJNA15577 | ENA

Escherichia coli

Project description:Hybrid atypical Enteropathogenic Escherichia coli: aEPEC/ExPEC and aEPEC/UPEC isolated from diarrhea

| PRJNA871776 | ENA

Transcriptomic profiles of host epithelial cells in response to actin rearrangement induced by atypical enteropathogenic Escherichia coli

Project description:Atypical enteropathogenic Escherichia coli (aEPEC) is amongst the leading causes of diarrheal disease worldwide. The colonization of the gut mucosa by aEPEC results in actin pedestal formation at the site of bacterial attachment. This cytoskeletal rearrangement is triggered by the interaction between the bacterial adhesin intimin and its receptor Tir, which is translocated through the type three secretion system, to the host cell. While some aEPEC require tyrosine phosphorylation of Tir and recruitment of the host Nck to trigger actin polymerization, certain aEPEC strains, whose Tir is not phosphorylated, rely on the effector EspFu for efficient actin remodeling. To understand how the host responds to these different actin polymerization signaling pathways, we analyzed gene expression changes in epithelial cells infected with pedestal-forming aEPEC strains using high-throughput RNA sequencing (RNA-seq).

2020-04-01 | GSE141446 | GEO

Escherichia coli O55:H7

Project description:Atypical Enteropathogenic Escherichia coli Virulence Regulation by QseC Quorum Sensing Adrenergic Sensor

| PRJNA185433 | ENA

Escherichia coli strain:2010137Y

Project description:Genome sequencing and assembly of an atypical enteropathogenic Escherichia coli strain 2010137Y

| PRJNA360328 | ENA

NleB2 from Enteropathogenic Escherichia coli is an arginine-glucose transferase

Project description:Within this study we demostrate that NleB2 from Enteropathogenic Escherichia coli is a arginine-glucose transferase. Using in vitro and in vivo assays we demostrate that control of the utelisation of UDP-GlcNAc or UDP-Glc is controlled by a single amino acid.

2021-05-25 | PXD021796 | Pride

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data