Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Thraustotheca clavata

ABSTRACT: Thraustotheca clavata overview

PROVIDER: PRJNA169385 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	JNBS01.dat.gz	Other
	JNBS01.fasta.gz	Fasta.gz
	JNBS01.master.dat	Other

Items per page:

1 - 4 of 4

Similar Datasets

Cyphonia clavata

Project description:Cyphonia clavata overview

| PRJNA928134 | ENA

Curvularia clavata

Project description:Curvularia clavata overview

| PRJNA827907 | ENA

Trichonephila clavata

Project description:Trichonephila clavata overview

| PRJNA749087 | ENA

Paramuricea clavata

Project description:Paramuricea clavata overview

| PRJNA934622 | ENA

Studies of two mutants for clavata genes (clavata-ralstonia)

Project description:ra08-02_clavata-ralstonia - clavata-ralstonia - Clavata1 (Clv1.12) and clavata2 (RPL10) mutants display an increased resistance to the bacteria Ralstonia solanacearum. Transcriptome analysis aims to understand resistance mechanisms. - 3 biological repets Keywords: wt vs mutant comparison

2009-10-30 | GSE18757 | GEO

Studies of two mutants for clavata genes (clavata-ralstonia)

2009-10-30 | E-GEOD-18757 | biostudies-arrayexpress

Trichonephila clavata

Project description:Trichonephila clavata draft genome

| PRJDB10007 | ENA

Paramuricea clavata

Project description:Paramuricea clavata Raw sequence reads

| PRJNA933813 | ENA

Trichonephila clavata

Project description:Multi-Omics Research of Trichonephila clavata spider

| PRJNA1058179 | ENA

Transcriptome insight into lignin utilization by Curvularia clavata and identification of regulators of laccase activity

Project description:Filamentous fungi are promising organisms for lignin degradation and mineralization. However, novel lignin-degrading fungal species are underexplored. Here, we isolated a fungal strain of Curvularia clavata that can utilize lignosulfonate as the carbon source and exhibited a relative high laccase activity during growth on lignosulfonate. Comparative transcriptomic analysis of the WT strain grown on glucose and lignosulfonate indicates that lignosulfonate and/or its metabolites have a significant effect on the gene expression profiles of C. clavata J1. Three regulators of laccase activity were identified, including a methyltransferase CcLaeA and two transcription factors, Rpn-4 and Tah-1. When grown on lignosulfonate, the laccase activity of the CclaeA and rpn-4 disrupted mutants (ΔCclaeA and Δrpn-4) increased by 49.2% and 43.5%, respectively, compared to the wild-type (WT) strain, whereas the tah-1 disrupted mutant (Δtah-1) decreased by 59.2%.

2024-10-09 | GSE278592 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data