Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Trypanosoma cruzi M6241 cl.6

ABSTRACT: Trypanosoma cruzi M6241 cl.6 Genome sequencing

PROVIDER: PRJNA169677 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR4023054.fastq.gz	Fastqsanger.gz
	SRR4023055.fastq.gz	Fastqsanger.gz
	SRR834806.fastq.gz	Fastqsanger.gz
	SRR834807.fastq.gz	Fastqsanger.gz
	SRR834808.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 19

Similar Datasets

Trypanosoma cruzi JR cl. 4

Project description:Trypanosoma cruzi JR cl. 4 genome sequencing project

| PRJNA59941 | ENA

Trypanosoma cruzi strain:CL Brener

Project description:Trypanosoma cruzi strain:CL Brener Genome sequencing and assembly

| PRJNA661279 | ENA

Trypanosoma cruzi strain:CL-Brener

Project description:Trypanosoma cruzi strain:CL-Brener Raw sequence reads

| PRJNA975587 | ENA

aCGH Trypanosoma cruzi G vs D11.

Project description:Comparative genomic analysis of Trypanosoma cruzi G with Trypanosoma cruzi D11.

2022-03-06 | GSE197870 | GEO

Trypanosoma cruzi CLB vs Trypanosoma rangeli and Trypanosoma conorhini

Project description:Comparative genomic analysis of T. cruzi CLB vs Trypanosoma rangeli (strains SC, Choachí, C23, H14, R1625 and PIT10) and Trypanosoma conorhini

2023-04-11 | GSE229354 | GEO

Trypanosoma cruzi strain:92 80 cl.2

Project description:Trypanosoma cruzi strain:92 80 cl.2 Genome sequencing and assembly

| PRJNA281250 | ENA

Trypanosoma cruzi strain:CL Brener

Project description:Transcriptome profiling of WT and TcZC3H12-knockout of Trypanosoma cruzi CL Brener

| PRJNA660030 | ENA

Experimental and Bioinformatic upgrade for genome-wide mapping of nucleosomes in Trypanosoma cruzi

Project description:We adapted the widely used digestion of chromatin with micrococcal nuclease (MNase) followed by deep sequencing to the parasite Trypanosoma cruzi, which presents numerous singularities. In this work, we use the hybrid CL Brener strain carrying two set of chromosomes from two substantially different parental strains. The hybrid strain CL Brener is composed of the Esmeraldo-like and non Esmeraldo-like haplotypes. Additionally, part of the genome was not assembled into any of the haplotypes. Sometimes the community working in the field uses just one haplotype as reference genome for simplicity. In this work, we emphasize the importance of using its whole genome as a reference. Moreover, we extended our analysis to a clonal strain, Sylvio-X10.

2023-10-23 | GSE176341 | GEO

Trypanosoma cruzi cruzi strain:CL Brener

Project description:The Trypanosoma cruzi CL Brener epimastigote transcriptome generated by de novo assembly of RNA-Seq data

| PRJNA315702 | ENA

Trypanosoma cruzi strain:CL Brener

Project description:Trypanosoma cruzi MNase-seq

| PRJNA665060 | ENA