Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Aspergillus glaucus CBS 516.65

ABSTRACT: Aspergillus glaucus CBS 516.65 Genome sequencing and assembly

PROVIDER: PRJNA169684 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	LSTL01.dat.gz	Other
	LSTL01.fasta.gz	Fasta.gz
	LSTL01.master.dat	Other
	SRR3928102_1.fastq.gz	Fastqsanger.gz
	SRR3928102_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 10

Similar Datasets

Comparative genomics analysis of Aspergillus glaucus CCHA provides insights into the adaptation of stress response

Project description:Aspergillus display an amazing level of diversity in physiologies, and environments that they occupy. Strategies for coping with diverse environmental stresses have evolved in different Aspergillus species. Therefore, Aspergillus are considered to be good models for investigating the adaptation and response to many natural and anthropogenic environmental stressors. Recent genome sequencing projects in several Aspergillus have provided insights into the molecular and genetic mechanisms underlying their responses to some environmental stressors. However, to better clarify the conserved and differentiated features of the adaptive response to specific stresses and to trace the evolutionary process of environmental adaptation and response in Aspergillus, insight from more Aspergillus species with different evolutionary positions, such as A. glaucus, and thus offer a large number of models of adaptation and response to various environmental stresses. Here, we report a high-quality reference genome assembly of A. glaucus CCHA from the surface of wild vegetation around saltern of Jilin, China, based on sequence data from whole-genome shotgun (WGS) sequencing platforms of Illumina solexa technologies. This assembly contains 106 scaffolds ( >1 Kb; N50 = ~0.795 Mb), has a length of ~28.9 Mb and covers ~97% of the predicted genome size (~120 Mb). Together with the data analyses from comprehensive transcriptomic surveys and comparative genomic analyses, we aim to obtain new insights into molecular mechanisms of the adaptation to living at high salt in the saltern

2017-09-26 | GSE104102 | GEO

Aspergillus glaucus CBS 516.65

Project description:Aspergillus glaucus CBS 516.65 Transcriptome or Gene expression

| PRJNA250963 | ENA

Aspergillus glaucus

Project description:Aspergillus glaucus overview

| PRJNA193561 | ENA

Aspergillus glaucus strain:CCHA

Project description:Aspergillus glaucus strain:CCHA Genome sequencing and assembly

| PRJNA396097 | ENA

Papilio glaucus

Project description:Papilio glaucus Genome sequencing and assembly

| PRJNA270125 | ENA

Aspergillus ruber CBS 135680

Project description:Aspergillus ruber CBS 135680 Genome sequencing and assembly

| PRJNA215335 | ENA

Aspergillus aculeatinus CBS 121060

Project description:Aspergillus aculeatinus CBS 121060 Genome sequencing and assembly

| PRJNA235093 | ENA

Aspergillus ellipticus CBS 707.79

Project description:Aspergillus ellipticus CBS 707.79 Genome sequencing and assembly

| PRJNA235088 | ENA

Aspergillus sclerotiicarbonarius CBS 121057

Project description:Aspergillus sclerotiicarbonarius CBS 121057 Genome sequencing and assembly

| PRJNA235081 | ENA

Aspergillus tubingensis CBS 134.48

Project description:Aspergillus tubingensis CBS 134.48 Genome sequencing and assembly

| PRJNA207690 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data