Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Escherichia coli O111:H21 str. 226

ABSTRACT: Escherichia coli O111:H21 str. 226 Genome sequencing

PROVIDER: PRJNA170726 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR524810.fastq.gz	Fastqsanger.gz
	SRR586270.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Escherichia coli O111 str. RM9322

Project description:Escherichia coli O111 str. RM9322 genome sequencing

| PRJNA69929 | ENA

Escherichia coli O91:H21 str. B2F1

Project description:Escherichia coli O91:H21 str. B2F1 Genome Sequencing

| PRJNA72245 | ENA

Escherichia coli O111:H8 str. 9662

Project description:Escherichia coli O111:H8 str. 9662 genome sequencing project

| PRJNA63307 | ENA

Escherichia coli O111:H8 str. 1074

Project description:Escherichia coli O111:H8 str. 1074 genome sequencing project

| PRJNA63309 | ENA

Escherichia coli O113:H21 str. CL-3

Project description:Escherichia coli O113:H21 str. CL-3 Genome Sequencing

| PRJNA72243 | ENA

Escherichia coli O111:H11 str. CVM9545

Project description:Escherichia coli O111:H11 str. CVM9545 Genome sequencing and assembly

| PRJNA89667 | ENA

Trout macrophages: Control vs. Escherichia coli PGNs from strains O111:B4 and K12

Project description:We evaluated both the transcriptomic and inflammatory response in trout (O. mykiss) macrophages in primary cell culture stimulated with DAP-PGN (DAP; meso-diaminopimelic acid, PGN; peptidoglycan) from two strains of Escherichia coli (PGN-K12 and PGN-O111:B4) over time. Transcript profiling was assessed using function-targeted cDNA microarrays hibridation (n = 36) to differential responses to both PGNs that are both time and treatment dependen over trout macrophages. Wild type E. coli (K12) generated an increase in transcript number/diversity over time whereas PGN-O111:B4 stimulation resulted in a more specific and intense response. In line with this gene Ontology analysis (GO) highlights a specific transcriptomic remodelling for PGN-O111:B4 whereas results obtained for PGN-K12 shows a high similarity with a general LPS response where multiple functional classes are related to ribosome biogenesis or cellular metabolism

2010-06-16 | GSE22330 | GEO

Trout macrophages: Control vs. Escherichia coli PGNs from strains O111:B4 and K12

2010-06-15 | E-GEOD-22330 | biostudies-arrayexpress

Escherichia coli O113:H21

Project description:Transcriptomes of Escherichia coli O113:H21

| PRJNA682189 | ENA

Escherichia coli O111

Project description:Escherichia coli O111 Genome sequencing and assembly

| PRJNA736395 | ENA