Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Aspergillus wentii DTO 134E9

ABSTRACT: Aspergillus wentii DTO 134E9 Genome sequencing and assembly

PROVIDER: PRJNA170886 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR3928107_1.fastq.gz	Fastqsanger.gz
	SRR3928107_2.fastq.gz	Fastqsanger.gz
	SRR3928108_1.fastq.gz	Fastqsanger.gz
	SRR3928108_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 5

Similar Datasets

Aspergillus wentii DTO 134E9

Project description:Aspergillus wentii DTO 134E9 Transcriptome

| PRJNA358290 | ENA

Aspergillus nidulans gfdB, encoding the hyperosmotic stress protein glycerol-3-phosphate dehydrogenase, disturbs osmoadaptation in Aspergillus wentii

Project description:The genome of the osmophilic Aspergillus wentii, unlike that of the osmotolerant Aspergillus nidulans, contains only the gfdA but not the gfdB glycerol 3-phosphate dehydrogenase gene. Here, we studied transcriptomic changes of A. nidulans (reference strain and DgfdB gene deletion mutant) and A. wentii (reference strain and An-gfdB expressing mutant) elicited by high osmolarity. A. nidulans showed canonic hyperosmotic stress response characterized by upregulation of trehalose and glycerol metabolism genes (including gfdB) as well as genes of the high-osmolarity glycerol (HOG) map kinase pathway. Deletion of gfdB caused only negligible alterations in the transcriptome suggesting that the glycerol metabolism was flexible enough to compensate for the missing GfdB activity in this species. A. wentii responded differently to increased osmolarity than A. nidulans: E.g.; bulk upregulation of glycerol and trehalose metabolism genes as well as HOG pathway genes were not detected. Expression of An-gfdB in A. wentii did not abolish osmophilia, but it reduced growth and caused much bigger alterations in the transcriptome than the missing gfdB gene did in A. nidulans. Flexible glycerol metabolism and hence two differently regulated gfd genes may be more beneficial for osmotolerant (living under changing osmolarity) than for osmophilic (living under constantly high osmolarity) species.

2024-02-28 | GSE255841 | GEO

Aspergillus wentii strain:CBS141173

Project description:Aspergillus wentii strain:CBS141173 Genome sequencing

| PRJNA1133277 | ENA

Aspergillus wentii strain:IMI 49129

Project description:Aspergillus wentii strain:IMI 49129 Genome sequencing and assembly

| PRJNA826222 | ENA

Aspergillus sp. DTO 356-C9 isolate:DTO 356-C9

Project description:Aspergillus paraconicus DTO 356-C9 Minimal Draft genome sequencing

| PRJNA713167 | ENA

Aspergillus sp. DTO 356-D6 isolate:DTO 356-D6

Project description:Aspergillus phaeropenciillioides DTO 356-D6 Minimal Draft genome sequencing

| PRJNA713168 | ENA

Aspergillus sp. DTO 241-G7 isolate:DTO 241-G7

Project description:Aspergillus spiritus DTO 241-G7 Minimal Draft genome sequencing

| PRJNA585382 | ENA

Aspergillus sp. DTO 356-D2 isolate:DTO 356-D2

Project description:Aspergillus neocaesiellus DTO 356-D2 Minimal Draft genome sequencing

| PRJNA585386 | ENA

Aspergillus megasporus strain:DTO 048-I3 | isolate:DTO 048-I3

Project description:Aspergillus megasporus DTO 048-I3 Minimal Draft genome sequencing

| PRJNA713164 | ENA

Aspergillus caperatus strain:DTO 337-E6 | isolate:DTO 337-E6

Project description:Aspergillus capperatus DTO 337-E6 Minimal Draft genome sequencing

| PRJNA713173 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data