Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Vibrio aerogenes CECT 7868

ABSTRACT: Vibrio aerogenes CECT 7868 Genome sequencing

PROVIDER: PRJNA171492 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR529887.fastq.gz	Fastqsanger.gz
	SRR529888.fastq.gz	Fastqsanger.gz
	SRR529890.fastq.gz	Fastqsanger.gz

Items per page:

1 - 3 of 3

Similar Datasets

Vibrio aerogenes CECT 7868T

Project description:Whole genome sequencing of Vibrio aerogenes CECT 7868, type strain

| PRJEB17789 | ENA

Vibrio aerogenes

Project description:Vibrio aerogenes overview

| PRJNA171599 | ENA

Vibrio marisflavi CECT 7928

Project description:Vibrio marisflavi CECT 7928 Genome sequencing

| PRJNA171491 | ENA

Differential gene expression of K. aerogenes during temperature entrainment

Project description:In this study we investigate and compare DEGs of K. aerogenes macrocolonies during temperature entrainment (12:12, 35°C:36°C) and subsequent free running conditions (35°C). The goal of this experiment was to identify rhythmically expressed genes in K. aerogenes, the first human gut commensal bacterium with described circadian clock (Paulose et al. 2016). K. aerogenes circadian clock is sensitive to temperature entrainment (Paulose et al. 2019). To further investigate this temperature entrainment of K. aerogenes we performed RNA sequencing experiment. We identified 48 differentially expressed genes when comparing timepoints ZT6 to ZT18, 427 differentially expressed genes when comparing timepoints ZT6 to CT6, 6 differentially expressed genes between timepoints CT6 and CT18, and 2 differentially expressed genes between timepoints ZT18 and CT18.

2023-10-09 | GSE185502 | GEO

Vibrio quintilis strain:CECT 7734

Project description:Vibrio quintilis CECT 7734 Genome Sequencing

| PRJNA171486 | ENA

Vibrio aestivus strain:CECT 7558

Project description:Vibrio aestivus strain:CECT 7558 Genome sequencing

| PRJNA170483 | ENA

Vibrio aestivus strain:CECT 7559

Project description:Vibrio aestivus strain:CECT 7559 Genome sequencing

| PRJNA170734 | ENA

Vibrio ruber CECT 7878T

Project description:Whole genome sequencing of Vibrio ruber CECT 7878, type strain