Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Sphingomonas trueperi

ABSTRACT: Sphingomonas trueperi overview

PROVIDER: PRJNA172506 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	JAATJB01.dat.gz	Other
	JAATJB01.fasta.gz	Fasta.gz
	JAATJB01.master.dat	Other
	SRR10151287_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 8

Similar Datasets

Sphingomonas trueperi strain:1152a

Project description:Sphingomonas trueperi 1152a genome sequencing

| PRJNA547153 | ENA

Sphingomonas trueperi NBRC 100456

Project description:Sphingomonas trueperi NBRC 100456 genome sequencing project

| PRJDB338 | ENA

Sphingomonas trueperi strain:1075 | isolate:DPS 1075

Project description:Sphingomonas trueperi 1075 genome sequencing

| PRJNA1115498 | ENA

Sphingomonas trueperi strain:1770 | isolate:DPS 1770

Project description:Sphingomonas trueperi 1770 genome sequencing

| PRJNA1115524 | ENA

Sphingomonas trueperi strain:DSM 7225 | isolate:DSM 7225

Project description:Sphingomonas trueperi DSM 7225 genome sequencing

| PRJNA583503 | ENA

Halobacillus trueperi

Project description:Halobacillus trueperi overview

| PRJNA484247 | ENA

Expression analysis of motile strain of Sphingomonas sp. A1

Project description:Investigation of whole genome gene expression level in motile strain of Sphingomonas. sp A1 All flagellar genes in motile strain of Sphingomonas. sp A1 are highly transcribed.

2014-11-01 | GSE62901 | GEO

Expression analysis of motile strain of Sphingomonas sp. A1

Project description:Investigation of whole genome gene expression level in motile strain of Sphingomonas. sp A1 All flagellar genes in motile strain of Sphingomonas. sp A1 are highly transcribed. A two chip study using total RNA recovered from wild-type and motile strains of Sphingomonas. sp A1 grown in 0.5% alginate medium.

2014-11-01 | E-GEOD-62901 | biostudies-arrayexpress

Organic Nitrogen Source is Critical for Welan Production in Sphingomonas sp. ATCC 31555

Project description:Welan gum is mainly produced by Sphingomonas sp. ATCC 31555 and has broad applications in industry such as that in cement production. Both carbon and nitrogen sources are essential for welan production. However, how nitrogen sources affect the metabolism and gene transcription of welan remains elusive. Here, we used next-generation sequencing RNA-seq to analyze the transcriptome of Sphingomonas sp. ATCC 31555 in the presence of inorganic or organic nitrogen sources. Enriched gene expression and pathway analysis suggest that organic nitrogen sources significantly enhanced the expression of genes in central metabolic pathways of Sphingomonas sp. ATCC 31555 and those critical for welan synthesis compared to that observed using inorganic nitrogen sources. The present study improves our understanding of the molecular mechanism underlying the use of nitrogen in welan synthesis in Sphingomonas sp., as well as provides an important transcriptome resource for Sphingomonas sp. in relation to nitrogen sources.

2016-03-25 | GSE79497 | GEO

Sphingomonas jaspsi

Project description:Sphingomonas jaspsi overview

| PRJNA185942 | ENA