Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Panax ginseng

ABSTRACT: Panax ginseng root, stem, leaf and flower transcriptome project

PROVIDER: PRJNA173906 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR547977.fastq.gz	Fastqsanger.gz
	SRR547984.fastq.gz	Fastqsanger.gz
	SRR547985.fastq.gz	Fastqsanger.gz
	SRR547986.fastq.gz	Fastqsanger.gz

Items per page:

1 - 4 of 4

Similar Datasets

Transcriptional profiling by high throughput sequencing of Panax ginseng C.A. Meyer leaf and stem transcriptomes during the leaf-expansion period.

Project description:In order to research the ginseng leaf-stem gene expression profiles of and dig out its function genes in the leaf-expansion period, the transcriptomic sequencing technology was set up the first time for five years the transcription of the Panax ginseng leaf-stem in the leaf-expansion period.

2012-07-31 | E-MTAB-937 | biostudies-arrayexpress

De novo sequencing and analysis of the Panax ginseng transcriptome in the leaf-expansion period

Project description:In order to analyze the transcriptome of ginseng root during leaf-expansion period and discover the genes during development, a cDNA sample was prepared from the leaf-expansion period of ginseng root and sequenced using the Illumina sequencing platform.The transcriptomic sequencing technology was set up the first time for five years the transcription of the ginseng root in the leaf-expansion period.

2013-06-15 | E-MTAB-974 | biostudies-arrayexpress

Panax ginseng

Project description:Panax ginseng transcriptome project

| PRJNA62877 | ENA

Spatial Protein Expression of Panax Ginseng by In-depth Proteomic Analysis for Ginsenoside Biosynthesis and Transportation

Project description:Spatial Protein Expression of Panax Ginseng by In-depth Proteomic Analysis for Ginsenoside Biosynthesis and Transportation. 2732 proteins and 3608 proteins were identified from ginseng root and cauline leaf, respectively, which was the largest data set reported so far.

| MSV000084331 | MassIVE

Panax ginseng

Project description:Panax ginseng transcriptome

| PRJNA302554 | ENA

Panax ginseng

Project description:Panax ginseng genome sequencing project

| PRJNA42881 | ENA

Transcript profiles of the flowering period Panax ginseng C.A. Meyer root and analysis the gene function

Project description:Panax ginseng C.A. Meyer is one of the most popular medicinal herbs. In order to research the genes that related to the flowering period of ginseng, and find out the antifungal proteins and transcription factors that combat various biotic and abiotic stress, a cDNA sample was prepared from the flowering period ginseng root of a five-year-old plant and sequenced using the Illumina sequencing platform. In this study, we produced nearly 40 million sequencing reads. These reads were assembled into 134,045 contigs using Trinity software (mean size: 282 bp). Based on a similarity search with known proteins, we identified 79,307 sequences with a cut-off E-value of 10-5. Assembled sequences were then annotated using gene ontology (GO) terms, clusters of orthologous group (COG) classifications and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways respectively.

2014-07-25 | E-MTAB-1239 | biostudies-arrayexpress

Panax ginseng

Project description:Panax ginseng

| PRJNA42929 | ENA

Panax ginseng transcriptome

Project description:Panax ginseng transcriptome

| PRJNA1111682 | ENA

Panax ginseng

Project description:Panax ginseng Transcriptome or Gene expression

| PRJNA1071309 | ENA