Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Salsuginibacillus kocurii

ABSTRACT: Salsuginibacillus kocurii overview

PROVIDER: PRJNA178133 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR892362_1.fastq.gz	Fastqsanger.gz
	SRR892362_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 3 of 3

Similar Datasets

Planococcus kocurii

Project description:Planococcus kocurii overview

| PRJNA656329 | ENA

Halorubrum kocurii

Project description:Halorubrum kocurii overview

| PRJNA187405 | ENA

Gene expression changes of Planococcus kocurii O516 in various culture conditions (with or without sulfamethoxazole)

Project description:The strain Planococcus kocurii O516 isolated from the marine culture environment was found to be stably and highly effective for the degradation of sulfamethoxazole. We investigated the expression behavior of functional genes related to this degradation ability in P. kocurii O516 under the culture conditions with or without sulfamethoxazole.

2020-08-08 | GSE150668 | GEO

Salsuginibacillus kocurii DSM 18087

Project description:Salsuginibacillus kocurii DSM 18087

| PRJNA178049 | ENA

Paracoccus kocurii DSM 8536

Project description:Paracoccus kocurii DSM 8536 Genome sequencing

| PRJNA221016 | ENA

Planococcus kocurii strain:ATCC 43650

Project description:Planococcus kocurii strain:ATCC 43650 Genome sequencing and assembly

| PRJNA305663 | ENA

Gene expression changes of Planococcus kocurii O516 in various culture conditions (with or without sulfamethoxazole)

Project description:Gene expression changes of Planococcus kocurii O516 in various culture conditions (with or without sulfamethoxazole)

| PRJNA633128 | ENA

The Osmoprotectant Switch of Potassium to Compatible Solutes in an Extremely Halophilic Archaea <i>Halorubrum kocurii</i> 2020YC7.

Project description:The main osmoadaptive mechanisms of extremely halophilic archaea include the "salt-in" strategy and the "compatible solutes" strategy. Here we report the osmoadaptive mechanism of an extremely halophilic archaea H. kocurii 2020YC7, isolated from a high salt environment sample. Genomic data revealed that strain 2020YC7 harbors genes trkA, trkH, kch for K+ uptake, kefB for K+ output, treS for trehalose production from polysaccharide, and betaine/carnitine/choline transporter family gene for glycine betaine uptake. Strain 2020YC7 could accumulate 8.17 to 28.67 μmol/mg protein K+ in a defined medium, with its content increasing along with the increasing salinity from 100 to 200 g/L. When exogenous glycine betaine was added, glycine betaine functioned as the primary osmotic solute between 200 and 250 g/L NaCl, which was accumulated up to 15.27 mg/mg protein in 2020YC7 cells. RT-qPCR results completely confirmed these results. Notably, the concentrations of intracellular trehalose decreased from 5.26 to 2.61 mg/mg protein as the NaCl increased from 50 to 250 g/L. In combination with this result, the transcript level of gene treS, which catalyzes the production of trehalose from polysaccharide, was significantly up-regulated at 50-100 g/L NaCl. Therefore, trehalose does not act as an osmotic solute at high NaCl concentrations (more than 100 g/L) but at relatively low NaCl concentrations (50-100 g/L). And we propose that the degradation of cell wall polysaccharide, as a source of trehalose in a low-salt environment, may be one of the reasons for the obligate halophilic characteristics of strain 2020YC7.

| S-EPMC9222508 | biostudies-literature

Halorubrum kocurii JCM 14978

Project description:Haloarchaeal genomes

| PRJNA174917 | ENA

Divergent Patterns of Endogenous Small RNA Populations From Seed and Vegetative Tissues of Glycine max

Project description:An overview of small RNAs sequences existing in seed development and contrasted with vegetative tissues of the soybean

2012-10-09 | GSE36728 | GEO